RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 ZNF224Q9NZL3 707 aa14.12□□□□□ -0.15
SMPD4-207ENST00000435455 TMCC3Q9ULS5 477 aa14.12□□□□□ -0.15
SMPD4-207ENST00000435455 ZNF469Q96JG9 3925 aaPredicted RBP14.11□□□□□ -0.15
SMPD4-207ENST00000435455 PDE5AO76074 875 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 NDUFB2O95178 105 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 STAMBPO95630 424 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 CD14P08571 375 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 BMP4P12644 408 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 ZNF14P17017 642 aaPredicted RBP14.11□□□□□ -0.15
SMPD4-207ENST00000435455 CALCRP30988 508 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 OMPP47874 163 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 LIMS1P48059 325 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 PTDSS1P48651 473 aaKnown RBP14.11□□□□□ -0.15
SMPD4-207ENST00000435455 PIGFQ07326 219 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 SEC23BQ15437 767 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 THEM4Q5T1C6 240 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 TMEM53Q6P2H8 277 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 MYPOPQ86VE0 399 aaPredicted RBP14.11□□□□□ -0.15
SMPD4-207ENST00000435455 ARIH2OSQ8N7S6 290 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 ZNF519Q8TB69 540 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 NMD3Q96D46 503 aaKnown RBP14.11□□□□□ -0.15
SMPD4-207ENST00000435455 RSRC1Q96IZ7 334 aaKnown RBP14.11□□□□□ -0.15
SMPD4-207ENST00000435455 Q96MF0 132 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 TSPAN32Q96QS1 320 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 BARX1Q9HBU1 254 aaPredicted RBP14.11□□□□□ -0.15
SMPD4-207ENST00000435455 NOX3Q9HBY0 568 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 DLL4Q9NR61 685 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 GRHPRQ9UBQ7 328 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 SIGLEC7Q9Y286 467 aa14.11□□□□□ -0.15
SMPD4-207ENST00000435455 ARFGEF3Q5TH69 2177 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 UNC119BA6NIH7 251 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 VSTM5A8MXK1 200 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 XKRYO14609 159 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 PTP4A3O75365 173 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 KRT36O76013 467 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 UBOX5O94941 541 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 RRM2P31350 389 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 IFNGR2P38484 337 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 GIPRP48546 466 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 ERVK-25P63136 954 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 MRPS34P82930 218 aaKnown RBP14.1□□□□□ -0.15
SMPD4-207ENST00000435455 SLC36A2Q495M3 483 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 SLC16A14Q7RTX9 510 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 NUP37Q8NFH4 326 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 ASB9Q96DX5 294 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 ZNF75AQ96N20 296 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 SH3GL3Q99963 347 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 BDH2Q9BUT1 245 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 CACNG6Q9BXT2 260 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 KCNN2Q9H2S1 579 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 MAGIXQ9H6Y5 334 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 SIAEQ9HAT2 523 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 CA10Q9NS85 328 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 SPEF1Q9Y4P9 236 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 PMF1-BGLAPU3KQ54 211 aa14.1□□□□□ -0.15
SMPD4-207ENST00000435455 SETD2Q9BYW2 2564 aaPredicted RBP14.1□□□□□ -0.15
SMPD4-207ENST00000435455 TCRBV5S2A0A599 114 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 AHCYL1O43865 530 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 SLC2A10O95528 541 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 ZNF26P17031 533 aaPredicted RBP14.09□□□□□ -0.15
SMPD4-207ENST00000435455 NPR2P20594 1047 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 GUCA1AP43080 201 aaPredicted RBP14.09□□□□□ -0.15
SMPD4-207ENST00000435455 MAGEA2P43356 314 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 HGFACQ04756 655 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 FMODQ06828 376 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 DNAL1Q4LDG9 190 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 FAM98BQ52LJ0 330 aaKnown RBP14.09□□□□□ -0.15
SMPD4-207ENST00000435455 GPR139Q6DWJ6 353 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 SLC25A47Q6Q0C1 308 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 LINC00471Q8N535 108 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 CCDC124Q96CT7 223 aaKnown RBP14.09□□□□□ -0.15
SMPD4-207ENST00000435455 MS4A3Q96HJ5 214 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 LRGUKQ96M69 825 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 ZNF570Q96NI8 536 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 GPX7Q96SL4 187 aaPredicted RBP14.09□□□□□ -0.15
SMPD4-207ENST00000435455 THTPAQ9BU02 230 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 TRIM15Q9C019 465 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 C1orf198Q9H425 327 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 ZNF442Q9H7R0 627 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 RNF121Q9H920 327 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 ADAM18Q9Y3Q7 739 aa14.09□□□□□ -0.15
SMPD4-207ENST00000435455 H7C417 338 aa14.08□□□□□ -0.16
SMPD4-207ENST00000435455 GYG2O15488 501 aa14.08□□□□□ -0.16
SMPD4-207ENST00000435455 OR10H3O60404 316 aa14.08□□□□□ -0.16
SMPD4-207ENST00000435455 PTHP01270 115 aa14.08□□□□□ -0.16
SMPD4-207ENST00000435455 IGHV4-39P01824 125 aa14.08□□□□□ -0.16
SMPD4-207ENST00000435455 SERPINA5P05154 406 aa14.08□□□□□ -0.16
SMPD4-207ENST00000435455 PATE4P0C8F1 98 aa14.08□□□□□ -0.16
SMPD4-207ENST00000435455 FPR3P25089 353 aa14.08□□□□□ -0.16
SMPD4-207ENST00000435455 SERPINF1P36955 418 aa14.08□□□□□ -0.16
SMPD4-207ENST00000435455 HMGA2P52926 109 aa14.08□□□□□ -0.16
SMPD4-207ENST00000435455 MS4A2Q01362 244 aa14.08□□□□□ -0.16
SMPD4-207ENST00000435455 TRAP1Q12931 704 aaKnown RBP14.08□□□□□ -0.16
SMPD4-207ENST00000435455 DAG1Q14118 895 aa14.08□□□□□ -0.16
SMPD4-207ENST00000435455 RAB39AQ14964 217 aa14.08□□□□□ -0.16
SMPD4-207ENST00000435455 ADIPOQQ15848 244 aa14.08□□□□□ -0.16
SMPD4-207ENST00000435455 SGCAQ16586 387 aa14.08□□□□□ -0.16
SMPD4-207ENST00000435455 SMARCD3Q6STE5 483 aa14.08□□□□□ -0.16
SMPD4-207ENST00000435455 DPY19L2P2Q6ZN68 376 aa14.08□□□□□ -0.16
SMPD4-207ENST00000435455 FAM122BQ7Z309 247 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms