RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ARHGAP40Q5TG30 622 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 DHRS11Q6UWP2 260 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 Q6ZVU0 165 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 DND1Q8IYX4 353 aaKnown RBP6.81□□□□□ -1.32
CPSF6-202ENST00000435070 OR5M8Q8NGP6 311 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 RAB40AQ8WXH6 277 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 ROBO4Q8WZ75 1007 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 SEMA6CQ9H3T2 930 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 KIF26AQ9ULI4 1882 aaPredicted RBP6.81□□□□□ -1.32
CPSF6-202ENST00000435070 C17orf113A0A1B0GUU1 675 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 BTBD17A6NE02 478 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 ARGFXA6NJG6 315 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 SLC34A2O95436 690 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 FGF19O95750 216 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 CFIP05156 583 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 AKR1C4P17516 323 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 TMEM115Q12893 351 aaPredicted RBP6.81□□□□□ -1.32
CPSF6-202ENST00000435070 MPPED2Q15777 294 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 CCL14Q16627 93 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 STAC2Q6ZMT1 411 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 OR4S1Q8NGB4 309 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 ATG5Q9H1Y0 275 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 CMC2Q9NRP2 79 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 MMP24Q9Y5R2 645 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 C7orf77A4D0Y5 90 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 MT-ND4LP03901 98 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 RAB5AP20339 215 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 AWAT1Q58HT5 328 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 TGIF2LXQ8IUE1 241 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 DCAF4L2Q8NA75 395 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 OR10AC1Q8NH08 325 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 CD99L2Q8TCZ2 262 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 CD300LFQ8TDQ1 290 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 ADAMTS15Q8TE58 950 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 NRSN2Q9GZP1 204 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 SMOC1Q9H4F8 434 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 C6orf106Q9H6K1 298 aaPredicted RBP6.81□□□□□ -1.32
CPSF6-202ENST00000435070 SFXN1Q9H9B4 322 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 MMP26Q9NRE1 261 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 GFOD1Q9NXC2 390 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 HSPA12AO43301 675 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 CTNSO60931 367 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 IFNA2P01563 188 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 CSF1P09603 554 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 AK4P27144 223 aaPredicted RBP6.81□□□□□ -1.32
CPSF6-202ENST00000435070 BSGP35613 385 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 TAS2R38P59533 333 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 GAMTQ14353 236 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 SURF2Q15527 256 aaPredicted RBP6.81□□□□□ -1.32
CPSF6-202ENST00000435070 TMEM173Q86WV6 379 aaPredicted RBP6.81□□□□□ -1.32
CPSF6-202ENST00000435070 SLC35F3Q8IY50 421 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 DEFB119Q8N690 84 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 EID2Q8N6I1 236 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 SLC16A11Q8NCK7 471 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 OR4K17Q8NGC6 315 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 OR9A1PQ8NGU1 263 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 PHOSPHO2Q8TCD6 241 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 ZNRF4Q8WWF5 429 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 MOAP1Q96BY2 351 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 PHYHIPLQ96FC7 376 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 MISP3Q96FF7 219 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 Q96M85 177 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 GAL3ST4Q96RP7 486 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 UTP23Q9BRU9 249 aaKnown RBP6.81□□□□□ -1.32
CPSF6-202ENST00000435070 MOB1AQ9H8S9 216 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 FAM86C1Q9NVL1 165 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 PRR13Q9NZ81 148 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 PISDQ9UG56 409 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 OR51B4Q9Y5P0 310 aa6.81□□□□□ -1.32
CPSF6-202ENST00000435070 TRAV8-7A0A075B6U6 113 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 MED19A0JLT2 244 aaPredicted RBP6.8□□□□□ -1.32
CPSF6-202ENST00000435070 PMS2P2O95744 297 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 TBX6O95947 436 aaPredicted RBP6.8□□□□□ -1.32
CPSF6-202ENST00000435070 LIPNQ5VXI9 398 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 SLC35F2Q8IXU6 374 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 GABRG1Q8N1C3 465 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 C15orf54Q8N8G6 183 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 AVL9Q8NBF6 648 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 TMEM239Q8WW34 195 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 BPIFA2Q96DR5 249 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 PIK3IP1Q96FE7 263 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 WASF3Q9UPY6 502 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 A0A087X0M5 115 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 LOC102724200A0A096LPH7 203 aaPredicted RBP6.8□□□□□ -1.32
CPSF6-202ENST00000435070 A0A1B0GX30 115 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 TVP23AA6NH52 213 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 DCTN6O00399 190 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 XKRYO14609 159 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 TCAPO15273 167 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 LRP3O75074 770 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 SOCS5O75159 536 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 HEXAP06865 529 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 GLP1RP43220 463 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 MRPS10P82664 201 aaKnown RBP6.8□□□□□ -1.32
CPSF6-202ENST00000435070 RSU1Q15404 277 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 ATPAF1Q5TC12 328 aaPredicted RBP6.8□□□□□ -1.32
CPSF6-202ENST00000435070 TMEM205Q6UW68 189 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 MRPL10Q7Z7H8 261 aaKnown RBP6.8□□□□□ -1.32
CPSF6-202ENST00000435070 BPIFB2Q8N4F0 458 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 ARL14EPQ8N8R7 260 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms