RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 RANGRFQ9HD47 186 aaPredicted RBP10.98□□□□□ -0.65
CLDN4-203ENST00000435050 TRAV18A0A075B6X5 111 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 A6NL46 340 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 GATBO75879 557 aaKnown RBP10.97□□□□□ -0.65
CLDN4-203ENST00000435050 GALNSP34059 522 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 RFC3P40938 356 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 ART1P52961 327 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 DMKNQ6E0U4 476 aaPredicted RBP10.97□□□□□ -0.65
CLDN4-203ENST00000435050 OPN5Q6U736 354 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 ZNF101Q8IZC7 436 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 CARFQ8N187 725 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 FAM46BQ96A09 425 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 TXNIPQ9H3M7 391 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 EXOSC3Q9NQT5 275 aaKnown RBP10.97□□□□□ -0.65
CLDN4-203ENST00000435050 B3GALT1Q9Y5Z6 326 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 CEP250Q9BV73 2442 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 ZNF20P17024 532 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 ITGA3P26006 1051 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 MST1P26927 711 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 CLDN17P56750 224 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 NANOS3P60323 173 aaKnown RBP10.97□□□□□ -0.65
CLDN4-203ENST00000435050 OR2G2Q8NGZ5 317 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 NPAS1Q99742 590 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 ZMAT3Q9HA38 289 aaKnown RBP10.97□□□□□ -0.65
CLDN4-203ENST00000435050 A0A087WV48 116 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 ZNF354AO60765 605 aaPredicted RBP10.97□□□□□ -0.65
CLDN4-203ENST00000435050 MPLP40238 635 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 KIR2DL3P43628 341 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 SSR4P51571 173 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 SF3A2Q15428 464 aaKnown RBP10.97□□□□□ -0.65
CLDN4-203ENST00000435050 KCNJ8Q15842 424 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 YRDCQ86U90 279 aaKnown RBP10.97□□□□□ -0.65
CLDN4-203ENST00000435050 ARHGEF39Q8N4T4 335 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 SPACA9Q96E40 222 aaPredicted RBP10.97□□□□□ -0.65
CLDN4-203ENST00000435050 ZNF426Q9BUY5 554 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 OR10A4Q9H209 315 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 RBFOX1Q9NWB1 397 aaKnown RBP10.97□□□□□ -0.65
CLDN4-203ENST00000435050 PAQR5Q9NXK6 330 aaPredicted RBP10.97□□□□□ -0.65
CLDN4-203ENST00000435050 MRM2Q9UI43 246 aaKnown RBP10.97□□□□□ -0.65
CLDN4-203ENST00000435050 RCE1Q9Y256 329 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 CACNG2Q9Y698 323 aa10.97□□□□□ -0.65
CLDN4-203ENST00000435050 DENND4AQ7Z401 1863 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 FAM172BPA6NC97 362 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 ANKRD33BA6NCL7 494 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 TRABD2BA6NFA1 517 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 A6NIZ1 184 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 F5H5K5 113 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 P2RY10O00398 339 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 EPXP11678 715 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 CCR6P51684 374 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 EFNA3P52797 238 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 RAP1BP61224 184 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 RAP1AP62834 184 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 MYBPHQ13203 477 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 SLC25A25Q6KCM7 469 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 COX15Q7KZN9 410 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 LRRC18Q8N456 261 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 MEIOBQ8N635 442 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 FCAMRQ8WWV6 532 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 RASL10BQ96S79 203 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 CCNL2Q96S94 520 aaPredicted RBP10.96□□□□□ -0.65
CLDN4-203ENST00000435050 CGGBP1Q9UFW8 167 aaPredicted RBP10.96□□□□□ -0.65
CLDN4-203ENST00000435050 FBXL2Q9UKC9 423 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 SPATA2Q9UM82 520 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 A0A1B0GVI7 797 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 CDAP32320 146 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 SNRPD2P62316 118 aaKnown RBP10.96□□□□□ -0.65
CLDN4-203ENST00000435050 CDONQ4KMG0 1287 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 RAB11FIP2Q7L804 512 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 KCTD20Q7Z5Y7 419 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 TIGD4Q8IY51 512 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 ESX1Q8N693 406 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 SLC35B4Q969S0 331 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 FYTTD1Q96QD9 318 aaKnown RBP10.96□□□□□ -0.65
CLDN4-203ENST00000435050 AMELYQ99218 206 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 CHST11Q9NPF2 352 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 HAO2Q9NYQ3 351 aa10.96□□□□□ -0.65
CLDN4-203ENST00000435050 PHYHO14832 338 aa10.96□□□□□ -0.66
CLDN4-203ENST00000435050 TOXO94900 526 aa10.96□□□□□ -0.66
CLDN4-203ENST00000435050 ASAH2BP0C7U1 165 aa10.96□□□□□ -0.66
CLDN4-203ENST00000435050 APOBEC1P41238 236 aaKnown RBP10.96□□□□□ -0.66
CLDN4-203ENST00000435050 SELENBP1Q13228 472 aa10.96□□□□□ -0.66
CLDN4-203ENST00000435050 YIF1BQ5BJH7 314 aa10.96□□□□□ -0.66
CLDN4-203ENST00000435050 OR1J4Q8NGS1 313 aa10.96□□□□□ -0.66
CLDN4-203ENST00000435050 ZNF524Q96C55 264 aa10.96□□□□□ -0.66
CLDN4-203ENST00000435050 S100A13Q99584 98 aa10.96□□□□□ -0.66
CLDN4-203ENST00000435050 SDHCQ99643 169 aaPredicted RBP10.96□□□□□ -0.66
CLDN4-203ENST00000435050 ABHD6Q9BV23 337 aa10.96□□□□□ -0.66
CLDN4-203ENST00000435050 AUNIPQ9H7T9 357 aa10.96□□□□□ -0.66
CLDN4-203ENST00000435050 ABRACLQ9P1F3 81 aa10.96□□□□□ -0.66
CLDN4-203ENST00000435050 KLHL9Q9P2J3 617 aa10.96□□□□□ -0.66
CLDN4-203ENST00000435050 LOXL2Q9Y4K0 774 aa10.96□□□□□ -0.66
CLDN4-203ENST00000435050 TP53BP1Q12888 1972 aaPredicted RBP10.96□□□□□ -0.66
CLDN4-203ENST00000435050 CACNA1GO43497 2377 aa10.95□□□□□ -0.66
CLDN4-203ENST00000435050 SMLR1H3BR10 107 aa10.95□□□□□ -0.66
CLDN4-203ENST00000435050 NOS1APO75052 506 aaPredicted RBP10.95□□□□□ -0.66
CLDN4-203ENST00000435050 WISP1O95388 367 aa10.95□□□□□ -0.66
CLDN4-203ENST00000435050 CLPSP04118 112 aa10.95□□□□□ -0.66
CLDN4-203ENST00000435050 ZXDAP98168 799 aa10.95□□□□□ -0.66
CLDN4-203ENST00000435050 RASGEF1BQ0VAM2 473 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms