RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 ELOVL6Q9H5J4 265 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 AUNIPQ9H7T9 357 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 KCNJ16Q9NPI9 418 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 CHRAC1Q9NRG0 131 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 C20orf96Q9NUD7 363 aaPredicted RBP1.92□□□□□ -2.1
PTPN4-205ENST00000433888 NUDT15Q9NV35 164 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 QPCTLQ9NXS2 382 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 MYEF2Q9P2K5 600 aaKnown RBP1.92□□□□□ -2.1
PTPN4-205ENST00000433888 KIF25Q9UIL4 384 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 GNPTGQ9UJJ9 305 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 CHTOPQ9Y3Y2 248 aaKnown RBP1.92□□□□□ -2.1
PTPN4-205ENST00000433888 COL5A1P20908 1838 aaPredicted RBP1.91□□□□□ -2.1
PTPN4-205ENST00000433888 MSH6P52701 1360 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 IGHV3OR16-13A0A075B7E8 117 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 IGKV1D-13A0A0B4J2D9 117 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 ZNF816-ZNF321PA0A0X1KG74 233 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 LINC00854A0A1B0GVQ3 168 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 SLC9A3R1O14745 358 aaPredicted RBP1.91□□□□□ -2.1
PTPN4-205ENST00000433888 MMP23AO75900 390 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 MBP02144 154 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 SERPINA5P05154 406 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 GIPP09681 153 aaPredicted RBP1.91□□□□□ -2.1
PTPN4-205ENST00000433888 H2AFZP0C0S5 128 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 UBCP0CG48 685 aaKnown RBP1.91□□□□□ -2.1
PTPN4-205ENST00000433888 IGKV1-13P0DP09 117 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 EIF2S2P20042 333 aaKnown RBP1.91□□□□□ -2.1
PTPN4-205ENST00000433888 CNR1P21554 472 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 STOMP27105 288 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 IL12AP29459 219 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 HMOX2P30519 316 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 FMO3P31513 532 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 RORAP35398 523 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 NAA10P41227 235 aaPredicted RBP1.91□□□□□ -2.1
PTPN4-205ENST00000433888 NBL1P41271 181 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 SSR1P43307 286 aaKnown RBP1.91□□□□□ -2.1
PTPN4-205ENST00000433888 RFX3P48380 749 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 RAB7AP51149 207 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 GPX6P59796 221 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 RAB11AP62491 216 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 ECH1Q13011 328 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 ARL6IP1Q15041 203 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 TSC22D1Q15714 1073 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 RAB11BQ15907 218 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 LRRC36Q1X8D7 754 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 ZNF630Q2M218 657 aaPredicted RBP1.91□□□□□ -2.1
PTPN4-205ENST00000433888 PARP15Q460N3 678 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 OR2B11Q5JQS5 317 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 PLCXD3Q63HM9 321 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 CYB5R2Q6BCY4 276 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 C22orf42Q6IC83 251 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 TMIGD1Q6UXZ0 262 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 SLC25A48Q6ZT89 311 aaKnown RBP1.91□□□□□ -2.1
PTPN4-205ENST00000433888 RFLNAQ6ZTI6 216 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 PRSS41Q7RTY9 318 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 LHFPL3Q86UP9 236 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 RALGPS2Q86X27 583 aaPredicted RBP1.91□□□□□ -2.1
PTPN4-205ENST00000433888 C17orf82Q86X59 251 aaPredicted RBP1.91□□□□□ -2.1
PTPN4-205ENST00000433888 FAM86B1Q8N7N1 296 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 ZNF557Q8N988 423 aaPredicted RBP1.91□□□□□ -2.1
PTPN4-205ENST00000433888 DCAF4L2Q8NA75 395 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 FBXL13Q8NEE6 735 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 OR52K1Q8NGK4 314 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 LYPD6BQ8NI32 183 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 ZNF596Q8TC21 504 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 GPX8Q8TED1 209 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 ZNF578Q96N58 590 aaPredicted RBP1.91□□□□□ -2.1
PTPN4-205ENST00000433888 SIKE1Q9BRV8 207 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 RSPO3Q9BXY4 272 aaPredicted RBP1.91□□□□□ -2.1
PTPN4-205ENST00000433888 POLR2J2Q9GZM3 115 aaKnown RBP1.91□□□□□ -2.1
PTPN4-205ENST00000433888 DNTTIP1Q9H147 329 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 POLR2J3Q9H1A7 115 aaKnown RBP1.91□□□□□ -2.1
PTPN4-205ENST00000433888 GBA3Q9H227 469 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 BLZF1Q9H2G9 400 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 OR51J1Q9H342 316 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 NIPAL2Q9H841 368 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 UGT1A7Q9HAW7 530 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 UGT1A8Q9HAW9 530 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 FANCEQ9HB96 536 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 SLCO1B3Q9NPD5 702 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 ACP6Q9NPH0 428 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 ZMAT5Q9UDW3 170 aaKnown RBP1.91□□□□□ -2.1
PTPN4-205ENST00000433888 PSG11Q9UQ72 335 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 WSB1Q9Y6I7 421 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 LRP4O75096 1905 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 THSD7BQ9C0I4 1608 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 SLIT3O75094 1523 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 CDHR2Q9BYE9 1310 aa1.91□□□□□ -2.1
PTPN4-205ENST00000433888 A0A0J9YXY3 114 aa1.9□□□□□ -2.11
PTPN4-205ENST00000433888 GABRR3A8MPY1 467 aa1.9□□□□□ -2.11
PTPN4-205ENST00000433888 HIDE1A8MVS5 230 aa1.9□□□□□ -2.11
PTPN4-205ENST00000433888 C12orf77C9JDV5 145 aa1.9□□□□□ -2.11
PTPN4-205ENST00000433888 CHST1O43916 411 aa1.9□□□□□ -2.11
PTPN4-205ENST00000433888 HUS1O60921 280 aa1.9□□□□□ -2.11
PTPN4-205ENST00000433888 ZNF780AO75290 641 aaPredicted RBP1.9□□□□□ -2.11
PTPN4-205ENST00000433888 CCNB2O95067 398 aa1.9□□□□□ -2.11
PTPN4-205ENST00000433888 CD160O95971 181 aa1.9□□□□□ -2.11
PTPN4-205ENST00000433888 MOSP00540 346 aa1.9□□□□□ -2.11
PTPN4-205ENST00000433888 TIMP1P01033 207 aa1.9□□□□□ -2.11
PTPN4-205ENST00000433888 IGHV2-5P01817 119 aa1.9□□□□□ -2.11
PTPN4-205ENST00000433888 IFNW1P05000 195 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms