RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 A0A0A6YYH2 397 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 A6NJ64 397 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 PCP4L1A6NKN8 68 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 ZNF99A8MXY4 864 aaPredicted RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 E7ESA3 106 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 H0YL77 283 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 BTN3A3O00478 584 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 AIM2O14862 343 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 TOX3O15405 576 aaPredicted RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 RS1O15537 224 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 ATP8B1O43520 1251 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 DENRO43583 198 aaKnown RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 PFKFB2O60825 505 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 MMP23AO75900 390 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 KRT16P08779 473 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 GNAO1P09471 354 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 CT62P0C5K7 136 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 OR4E1P0C645 316 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 PSKH1P11801 424 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 S100A1P23297 94 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 HSD11B1P28845 292 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 GNA11P29992 359 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 YWHABP31946 246 aaKnown RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 CFHR2P36980 270 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 SLC26A3P40879 764 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 KCNJ3P48549 501 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 AP3S2P59780 193 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 CXCR4P61073 352 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 EXOSC2Q13868 293 aaKnown RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 GK3PQ14409 553 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 SPCS2Q15005 226 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 RAB35Q15286 201 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 UAP1Q16222 522 aaPredicted RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 EXOC3L4Q17RC7 722 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 ZNF699Q32M78 642 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 ZNF691Q5VV52 312 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 GPR107Q5VW38 600 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 CLEC18BQ6UXF7 455 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 Q6ZPB1 254 aaPredicted RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 C19orf35Q6ZS72 473 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 SNX20Q7Z614 316 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 TAC4Q86UU9 113 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 SERPINA9Q86WD7 417 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 SLC13A5Q86YT5 568 aaPredicted RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 FUNDC1Q8IVP5 155 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 IQCKQ8N0W5 287 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 C17orf78Q8N4C9 275 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 CSNK1A1LQ8N752 337 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 FBXO36Q8NEA4 188 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 C19orf18Q8NEA5 215 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 ESR2Q92731 530 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 SLC25A36Q96CQ1 311 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 CMTM5Q96DZ9 223 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 PELI1Q96FA3 418 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 DNAJC1Q96KC8 554 aaKnown RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 PACRGQ96M98 296 aaPredicted RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 TAAR1Q96RJ0 339 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 FEM1AQ9BSK4 669 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 MED10Q9BTT4 135 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 CALN1Q9BXU9 219 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 SLC25A39Q9BZJ4 359 aaPredicted RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 NXF3Q9H4D5 531 aaKnown RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 FAM124BQ9H5Z6 455 aaPredicted RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 METTL8Q9H825 291 aaKnown RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 PARVBQ9HBI1 364 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 MRPS30Q9NP92 439 aaKnown RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 DYRK4Q9NR20 520 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 C20orf96Q9NUD7 363 aaPredicted RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 UFSP2Q9NUQ7 469 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 DCAF13Q9NV06 445 aaKnown RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 MYEF2Q9P2K5 600 aaKnown RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 PHF11Q9UIL8 331 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 FLVCR2Q9UPI3 526 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 PIGLQ9Y2B2 252 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 STARD10Q9Y365 291 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 NPTNQ9Y639 398 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 URGCP-MRPS24S4R325 110 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 MROH7-TTC4A0A0A0MT08 1334 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 MGAT4DA6NG13 374 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 TMEM238C9JI98 176 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 LRRN3E7EW58 273 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 KMOO15229 486 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 LATO43561 262 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 TBL1XO60907 577 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 ENTPD5O75356 428 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 OR2F2O95006 317 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 NDUFA7O95182 113 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 SERPINE2P07093 398 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 RPS17P08708 135 aaKnown RBP2.11□□□□□ -2.07
CLK1-204ENST00000432425 GIMD1P0DJR0 217 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 PSG2P11465 335 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 SYT1P21579 422 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 CCNE1P24864 410 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 HLA-DMAP28067 261 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 TEAD1P28347 426 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 OR1E1P30953 314 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 CASP14P31944 242 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 UGT1A5P35504 534 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 GCKP35557 465 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 RBMXP38159 391 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms