RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 ZNF295-AS1Q8N0V1 137 aa12.6□□□□□ -0.39
CSTF3-202ENST00000431742 OR2T33Q8NG76 320 aa12.6□□□□□ -0.39
CSTF3-202ENST00000431742 TEX47Q8TBZ9 253 aa12.6□□□□□ -0.39
CSTF3-202ENST00000431742 RBP7Q96R05 134 aa12.6□□□□□ -0.39
CSTF3-202ENST00000431742 FOXB1Q99853 325 aa12.6□□□□□ -0.39
CSTF3-202ENST00000431742 HEATR1Q9H583 2144 aaKnown RBP12.6□□□□□ -0.39
CSTF3-202ENST00000431742 OBP2BQ9NPH6 170 aa12.6□□□□□ -0.39
CSTF3-202ENST00000431742 KRT84Q9NSB2 600 aa12.6□□□□□ -0.39
CSTF3-202ENST00000431742 TMEM38BQ9NVV0 291 aa12.6□□□□□ -0.39
CSTF3-202ENST00000431742 SLC25A15Q9Y619 301 aa12.6□□□□□ -0.39
CSTF3-202ENST00000431742 RAI1Q7Z5J4 1906 aaPredicted RBP12.6□□□□□ -0.39
CSTF3-202ENST00000431742 ABCA12Q86UK0 2595 aa12.6□□□□□ -0.39
CSTF3-202ENST00000431742 CADP27708 2225 aa12.6□□□□□ -0.39
CSTF3-202ENST00000431742 FBN2P35556 2912 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 H3BN98 237 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 SIAH2O43255 324 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 MITFO75030 526 aaPredicted RBP12.59□□□□□ -0.39
CSTF3-202ENST00000431742 SEC14L2O76054 403 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 ALPLP05186 524 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 HOXB1P14653 301 aaPredicted RBP12.59□□□□□ -0.39
CSTF3-202ENST00000431742 B4GALT1P15291 398 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 CTLA4P16410 223 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 GRK5P34947 590 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 PPA1Q15181 289 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 RCN1Q15293 331 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 NRN1LQ496H8 165 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 LCE2DQ5TA82 110 aaPredicted RBP12.59□□□□□ -0.39
CSTF3-202ENST00000431742 ZNF787Q6DD87 383 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 NPEPL1Q8NDH3 523 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 OR4K13Q8NH42 304 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 ZC3HAV1LQ96H79 300 aaKnown RBP12.59□□□□□ -0.39
CSTF3-202ENST00000431742 DDOQ99489 341 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 CIB1Q99828 191 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 RBM4BQ9BQ04 359 aaKnown RBP12.59□□□□□ -0.39
CSTF3-202ENST00000431742 RBM4Q9BWF3 364 aaKnown RBP12.59□□□□□ -0.39
CSTF3-202ENST00000431742 SYT4Q9H2B2 425 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 SLC25A19Q9HC21 320 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 ZNF226Q9NYT6 803 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 USE1Q9NZ43 259 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 AMDHD2Q9Y303 409 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 APCP25054 2843 aa12.59□□□□□ -0.39
CSTF3-202ENST00000431742 ITPR2Q14571 2701 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 A0A096LPE4 126 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 A0A1W2PPZ6 126 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 FAM221AA4D161 298 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 OR6C68A6NDL8 312 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 ZNF503-AS2A6NEH8 195 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 DEFB108AA8MXU0 73 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 GOSR1O95249 250 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 ANPEPP15144 967 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 IGFBP5P24593 272 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 LOXP28300 417 aaPredicted RBP12.58□□□□□ -0.4
CSTF3-202ENST00000431742 NOS3P29474 1203 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 GIPRP48546 466 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 ZNF84P51523 738 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 CRISP1P54107 249 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 ESRRGP62508 458 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 MRPS34P82930 218 aaKnown RBP12.58□□□□□ -0.4
CSTF3-202ENST00000431742 CDK5Q00535 292 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.58□□□□□ -0.4
CSTF3-202ENST00000431742 DAG1Q14118 895 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 SLC35F1Q5T1Q4 408 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 SLC27A4Q6P1M0 643 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 LEG1Q6P5S2 330 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 KLHL24Q6TFL4 600 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 ZNF813Q6ZN06 617 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 WFDC8Q8IUA0 241 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 IQCF1Q8N6M8 205 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 SDR9C7Q8NEX9 313 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 OR52N5Q8NH56 324 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 MARVELD3Q96A59 401 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 NABP1Q96AH0 204 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 MUCL1Q96DR8 90 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 C14orf79Q96F83 325 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 NMNAT3Q96T66 252 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 ZNF224Q9NZL3 707 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 NPAP1Q9NZP6 1156 aa12.58□□□□□ -0.4
CSTF3-202ENST00000431742 PLCE1Q9P212 2302 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 TACC2O95359 2948 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 IGLV1-36A0A0B4J1U3 117 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 A0A1W2PR80 420 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 A6NNC1 897 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 DCTN6O00399 190 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 EI24O14681 340 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 BAG2O95816 211 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 POU1F1P28069 291 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 HOXC12P31275 282 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 GINS1Q14691 196 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 ACSM5Q6NUN0 579 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 ZBTB46Q86UZ6 589 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 JAZF1Q86VZ6 243 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 CCDC36Q8IYA8 594 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 SLC22A24Q8N4F4 322 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 CBR4Q8N4T8 237 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 SLC37A3Q8NCC5 494 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 OR52E2Q8NGJ4 325 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 NSMAFQ92636 917 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 C9orf16Q9BUW7 83 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 GABARAPL3Q9BY60 117 aa12.57□□□□□ -0.4
CSTF3-202ENST00000431742 NUAK2Q9H093 628 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms