RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ZIC3O60481 467 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 RAD1O60671 282 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 HPGDSO60760 199 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 ABHD16AO95870 558 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 SERPINA7P05543 415 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 GAAP10253 952 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 P2RY4P51582 365 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 ADAM8P78325 824 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 ZNF79Q15937 498 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 CCDC58Q4VC31 144 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 IDNKQ5T6J7 187 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 TIGD3Q6B0B8 471 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 OTOSQ8NHW6 89 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 AP3S1Q92572 193 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 DIRAS2Q96HU8 199 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 SNX18Q96RF0 628 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 KCNK17Q96T54 332 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 SLCO1C1Q9NYB5 712 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 SPAARA0A1B0GVQ0 90 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 H3BSH0 61 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 TERTO14746 1132 aaKnown RBP14.92□□□□□ -0.02
USHBP1-203ENST00000431146 ZFPL1O95159 310 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 WNT11O96014 354 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 KRT8P05787 483 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 MYL9P24844 172 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 ADH6P28332 368 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 DSCR4P56555 118 aaPredicted RBP14.92□□□□□ -0.02
USHBP1-203ENST00000431146 ODF4Q2M2E3 257 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 H3F3CQ6NXT2 135 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 LRRN1Q6UXK5 716 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 PIP4P1Q86T03 277 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 SLC22A16Q86VW1 577 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 ZNF227Q86WZ6 799 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 GTPBP8Q8N3Z3 284 aaPredicted RBP14.92□□□□□ -0.02
USHBP1-203ENST00000431146 COX4I2Q96KJ9 171 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 WDFY2Q96P53 400 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 MROQ9BYG7 248 aa14.92□□□□□ -0.02
USHBP1-203ENST00000431146 LOC400499M0QZD8 3231 aa14.91□□□□□ -0.02
USHBP1-203ENST00000431146 OR2M5A3KFT3 312 aa14.91□□□□□ -0.02
USHBP1-203ENST00000431146 A6NIZ1 184 aa14.91□□□□□ -0.02
USHBP1-203ENST00000431146 SULT2B1O00204 365 aa14.91□□□□□ -0.02
USHBP1-203ENST00000431146 P04436 131 aa14.91□□□□□ -0.02
USHBP1-203ENST00000431146 TGM1P22735 817 aa14.91□□□□□ -0.02
USHBP1-203ENST00000431146 RAP1BP61224 184 aa14.91□□□□□ -0.02
USHBP1-203ENST00000431146 RAP1AP62834 184 aa14.91□□□□□ -0.02
USHBP1-203ENST00000431146 OC90Q02509 493 aaPredicted RBP14.91□□□□□ -0.02
USHBP1-203ENST00000431146 OXA1LQ15070 435 aa14.91□□□□□ -0.02
USHBP1-203ENST00000431146 FAM131AQ6UXB0 335 aa14.91□□□□□ -0.02
USHBP1-203ENST00000431146 DND1Q8IYX4 353 aaKnown RBP14.91□□□□□ -0.02
USHBP1-203ENST00000431146 RGP1Q92546 391 aaPredicted RBP14.91□□□□□ -0.02
USHBP1-203ENST00000431146 NSMAFQ92636 917 aa14.91□□□□□ -0.02
USHBP1-203ENST00000431146 NTNG2Q96CW9 530 aa14.91□□□□□ -0.02
USHBP1-203ENST00000431146 SGCZQ96LD1 299 aa14.91□□□□□ -0.02
USHBP1-203ENST00000431146 FRRS1LQ9P0K9 344 aa14.91□□□□□ -0.02
USHBP1-203ENST00000431146 MALT1Q9UDY8 824 aa14.91□□□□□ -0.02
USHBP1-203ENST00000431146 ZFHX4Q86UP3 3567 aa14.91□□□□□ -0.02
USHBP1-203ENST00000431146 A0A1W2PNV4 684 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 ACOD1A6NK06 481 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 TACSTD2P09758 323 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 CRABP1P29762 137 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 CTAG1AP78358 180 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 GLO1Q04760 184 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 CAMK2DQ13557 499 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 ZNF181Q2M3W8 571 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 TMEM225Q6GV28 225 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 UEVLDQ8IX04 471 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 OR8H2Q8N162 312 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 SLC25A43Q8WUT9 341 aaPredicted RBP14.9□□□□□ -0.02
USHBP1-203ENST00000431146 GPR87Q9BY21 358 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 B3GAT2Q9NPZ5 323 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 PHF3Q92576 2039 aaKnown RBP14.9□□□□□ -0.02
USHBP1-203ENST00000431146 ZNF292O60281 2723 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 A0A087WZY1 265 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 IGHV3-15A0A0B4J1V0 119 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 C21orf140B9A014 251 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 H0YC42 278 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 SERPINA3P01011 423 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 SLC25A35Q3KQZ1 300 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 STPG1Q5TH74 334 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 CARD17Q5XLA6 110 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 NHLRC1Q6VVB1 395 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 MAP6Q96JE9 813 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 TIGARQ9NQ88 270 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 DEPPQ9NTK1 212 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 STMN3Q9NZ72 180 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 KLHL13Q9P2N7 655 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 TMEM14AQ9Y6G1 99 aa14.9□□□□□ -0.02
USHBP1-203ENST00000431146 STMND1H3BQB6 276 aa14.89□□□□□ -0.03
USHBP1-203ENST00000431146 RFPL3SP0C7P2 107 aa14.89□□□□□ -0.03
USHBP1-203ENST00000431146 SLC2A2P11168 524 aaPredicted RBP14.89□□□□□ -0.03
USHBP1-203ENST00000431146 TCF15Q12870 199 aa14.89□□□□□ -0.03
USHBP1-203ENST00000431146 ALKBH1Q13686 389 aaKnown RBP14.89□□□□□ -0.03
USHBP1-203ENST00000431146 EIF2B1Q14232 305 aaKnown RBP14.89□□□□□ -0.03
USHBP1-203ENST00000431146 NDUFA5Q16718 116 aa14.89□□□□□ -0.03
USHBP1-203ENST00000431146 SPINK14Q6IE38 97 aa14.89□□□□□ -0.03
USHBP1-203ENST00000431146 KCTD20Q7Z5Y7 419 aa14.89□□□□□ -0.03
USHBP1-203ENST00000431146 YRDCQ86U90 279 aaKnown RBP14.89□□□□□ -0.03
USHBP1-203ENST00000431146 LINC00346Q8IVM7 164 aa14.89□□□□□ -0.03
USHBP1-203ENST00000431146 RDH10Q8IZV5 341 aa14.89□□□□□ -0.03
USHBP1-203ENST00000431146 POC5Q8NA72 575 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms