RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 DIDO1Q9BTC0 2240 aaKnown RBP9.7□□□□□ -0.86
CHD4-202ENST00000430771 A0A1W2PPL8 197 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 CIB4A0PJX0 185 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 DLGAP1O14490 977 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 PRODHO43272 600 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 SLC16A7O60669 478 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 FARS2O95363 451 aaKnown RBP9.69□□□□□ -0.86
CHD4-202ENST00000430771 SLC2A10O95528 541 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 ITGA5P08648 1049 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 CTLA4P16410 223 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 NPR2P20594 1047 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 PSMB1P20618 241 aaKnown RBP9.69□□□□□ -0.86
CHD4-202ENST00000430771 IGHV1-2P23083 117 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 POLR2IP36954 125 aaKnown RBP9.69□□□□□ -0.86
CHD4-202ENST00000430771 PEX19P40855 299 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 CENPAP49450 140 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 BLVRAP53004 296 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 SORDQ00796 357 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 GLO1Q04760 184 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 NRN1LQ496H8 165 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 PHYHD1Q5SRE7 291 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 OR7E24Q6IFN5 339 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 SLC25A47Q6Q0C1 308 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 KLHL24Q6TFL4 600 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 SSX8Q7RTT4 187 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 CXorf67Q86X51 503 aaPredicted RBP9.69□□□□□ -0.86
CHD4-202ENST00000430771 GID4Q8IVV7 300 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 C17orf78Q8N4C9 275 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 TCEANCQ8N8B7 351 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 CYB561A3Q8NBI2 242 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 NPEPL1Q8NDH3 523 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 PROKR2Q8NFJ6 384 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 TMEM163Q8TC26 289 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 TRUB1Q8WWH5 349 aaKnown RBP9.69□□□□□ -0.86
CHD4-202ENST00000430771 NANOS1Q8WY41 292 aaKnown RBP9.69□□□□□ -0.86
CHD4-202ENST00000430771 NSMAFQ92636 917 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 OTULINQ96BN8 352 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 ZNF184Q99676 751 aaPredicted RBP9.69□□□□□ -0.86
CHD4-202ENST00000430771 USB1Q9BQ65 265 aaKnown RBP9.69□□□□□ -0.86
CHD4-202ENST00000430771 HDHD5Q9BXW7 423 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 OR10A4Q9H209 315 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 HINT3Q9NQE9 182 aaKnown RBP9.69□□□□□ -0.86
CHD4-202ENST00000430771 TMEM38BQ9NVV0 291 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 GPR52Q9Y2T5 361 aa9.69□□□□□ -0.86
CHD4-202ENST00000430771 FREM1Q5H8C1 2179 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 NKX2-6A6NCS4 301 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 OR6C68A6NDL8 312 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 SNTNA6NMZ2 147 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 E9PQ18 207 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 PRKYO43930 277 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 RAD51DO75771 328 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 LYZL6O75951 148 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 B4GALT1P15291 398 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 SPI1P17947 270 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 RPS7P62081 194 aaKnown RBP9.68□□□□□ -0.86
CHD4-202ENST00000430771 IL5RAQ01344 420 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 SLC35D3Q5M8T2 416 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 SFRP5Q5T4F7 317 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 C1QTNF12Q5T7M4 302 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 C9orf135Q5VTT2 229 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 ZNF691Q5VV52 312 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 NXNL2Q5VZ03 156 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 PLBD1Q6P4A8 553 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 ANKRD16Q6P6B7 361 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 ZNF813Q6ZN06 617 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 LINGO2Q7L985 606 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 BHLHA15Q7RTS1 189 aaPredicted RBP9.68□□□□□ -0.86
CHD4-202ENST00000430771 ZBTB46Q86UZ6 589 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 C8orf59Q8N0T1 100 aaPredicted RBP9.68□□□□□ -0.86
CHD4-202ENST00000430771 ZNF433Q8N7K0 673 aaPredicted RBP9.68□□□□□ -0.86
CHD4-202ENST00000430771 STEAP2Q8NFT2 490 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 OR9Q1Q8NGQ5 310 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 OR1K1Q8NGR3 316 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 NMNAT2Q9BZQ4 307 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 NUAK2Q9H093 628 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 NELFAQ9H3P2 528 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 Q9H521 79 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 RERGLQ9H628 205 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 H2AFY2Q9P0M6 372 aaPredicted RBP9.68□□□□□ -0.86
CHD4-202ENST00000430771 MOKQ9UQ07 419 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 POLR1DQ9Y2S0 133 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 HSPE1-MOB4S4R3N1 261 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 CACNA1CQ13936 2221 aa9.68□□□□□ -0.86
CHD4-202ENST00000430771 IGLV1-36A0A0B4J1U3 117 aa9.67□□□□□ -0.86
CHD4-202ENST00000430771 IGKV1D-43A0A0B4J1Z2 117 aa9.67□□□□□ -0.86
CHD4-202ENST00000430771 CLEC18AA5D8T8 446 aa9.67□□□□□ -0.86
CHD4-202ENST00000430771 SLC22A31A6NKX4 558 aa9.67□□□□□ -0.86
CHD4-202ENST00000430771 FAM183AA6NL82 134 aa9.67□□□□□ -0.86
CHD4-202ENST00000430771 C16orf97H3BN30 126 aa9.67□□□□□ -0.86
CHD4-202ENST00000430771 M0R129 80 aa9.67□□□□□ -0.86
CHD4-202ENST00000430771 TLX2O43763 284 aaPredicted RBP9.67□□□□□ -0.86
CHD4-202ENST00000430771 PPP3CBP16298 524 aa9.67□□□□□ -0.86
CHD4-202ENST00000430771 MSR1P21757 451 aa9.67□□□□□ -0.86
CHD4-202ENST00000430771 LAP3P28838 519 aa9.67□□□□□ -0.86
CHD4-202ENST00000430771 CCKARP32238 428 aa9.67□□□□□ -0.86
CHD4-202ENST00000430771 UGT2B10P36537 528 aa9.67□□□□□ -0.86
CHD4-202ENST00000430771 ADARB1P78563 741 aaKnown RBP9.67□□□□□ -0.86
CHD4-202ENST00000430771 MRPS34P82930 218 aaKnown RBP9.67□□□□□ -0.86
CHD4-202ENST00000430771 ARF1P84077 181 aaKnown RBP9.67□□□□□ -0.86
CHD4-202ENST00000430771 KLHL12Q53G59 568 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms