RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 C10orf128Q5T292 105 aa13.93□□□□□ -0.18
PTPRA-206ENST00000430705 GKAP1Q5VSY0 366 aaPredicted RBP13.93□□□□□ -0.18
PTPRA-206ENST00000430705 C10orf82Q8WW14 230 aa13.93□□□□□ -0.18
PTPRA-206ENST00000430705 TMEM239Q8WW34 195 aa13.93□□□□□ -0.18
PTPRA-206ENST00000430705 LIPHQ8WWY8 451 aa13.93□□□□□ -0.18
PTPRA-206ENST00000430705 GTF3AQ92664 365 aaKnown RBP13.93□□□□□ -0.18
PTPRA-206ENST00000430705 HDAC2Q92769 488 aaKnown RBP13.93□□□□□ -0.18
PTPRA-206ENST00000430705 SGTBQ96EQ0 304 aa13.93□□□□□ -0.18
PTPRA-206ENST00000430705 OR51B6Q9H340 312 aa13.93□□□□□ -0.18
PTPRA-206ENST00000430705 FGFR1OP2Q9NVK5 253 aa13.93□□□□□ -0.18
PTPRA-206ENST00000430705 SPEF1Q9Y4P9 236 aa13.93□□□□□ -0.18
PTPRA-206ENST00000430705 IGLV3-9A0A075B6K5 115 aa13.92□□□□□ -0.18
PTPRA-206ENST00000430705 FAM220BPB1ANY3 271 aa13.92□□□□□ -0.18
PTPRA-206ENST00000430705 SNAP29O95721 258 aa13.92□□□□□ -0.18
PTPRA-206ENST00000430705 MAGEB1P43366 347 aa13.92□□□□□ -0.18
PTPRA-206ENST00000430705 CLRN1P58418 232 aa13.92□□□□□ -0.18
PTPRA-206ENST00000430705 NRN1LQ496H8 165 aa13.92□□□□□ -0.18
PTPRA-206ENST00000430705 CYBRD1Q53TN4 286 aa13.92□□□□□ -0.18
PTPRA-206ENST00000430705 LINC01356Q8N9X3 169 aa13.92□□□□□ -0.18
PTPRA-206ENST00000430705 CLDND2Q8NHS1 167 aa13.92□□□□□ -0.18
PTPRA-206ENST00000430705 ECSITQ9BQ95 431 aa13.92□□□□□ -0.18
PTPRA-206ENST00000430705 C19orf24Q9BVV8 132 aa13.92□□□□□ -0.18
PTPRA-206ENST00000430705 POLR2J2Q9GZM3 115 aaKnown RBP13.92□□□□□ -0.18
PTPRA-206ENST00000430705 POLR2J3Q9H1A7 115 aaKnown RBP13.92□□□□□ -0.18
PTPRA-206ENST00000430705 MS4A5Q9H3V2 200 aa13.92□□□□□ -0.18
PTPRA-206ENST00000430705 INIPQ9NRY2 104 aa13.92□□□□□ -0.18
PTPRA-206ENST00000430705 ZNF275Q9NSD4 429 aaPredicted RBP13.92□□□□□ -0.18
PTPRA-206ENST00000430705 MAN2C1Q9NTJ4 1040 aa13.92□□□□□ -0.18
PTPRA-206ENST00000430705 BAG5Q9UL15 447 aa13.92□□□□□ -0.18
PTPRA-206ENST00000430705 A4GNTQ9UNA3 340 aa13.92□□□□□ -0.18
PTPRA-206ENST00000430705 TENM1Q9UKZ4 2725 aa13.92□□□□□ -0.18
PTPRA-206ENST00000430705 A0A1W2PPW3 197 aa13.91□□□□□ -0.18
PTPRA-206ENST00000430705 BBIP1A8MTZ0 92 aa13.91□□□□□ -0.18
PTPRA-206ENST00000430705 FAM157AC9JC47 383 aa13.91□□□□□ -0.18
PTPRA-206ENST00000430705 MGRN1O60291 552 aa13.91□□□□□ -0.18
PTPRA-206ENST00000430705 HIST1H2ABP04908 130 aa13.91□□□□□ -0.18
PTPRA-206ENST00000430705 ZNF250P15622 560 aa13.91□□□□□ -0.18
PTPRA-206ENST00000430705 ACADSP16219 412 aa13.91□□□□□ -0.18
PTPRA-206ENST00000430705 ACHEP22303 614 aa13.91□□□□□ -0.18
PTPRA-206ENST00000430705 CDAP32320 146 aa13.91□□□□□ -0.18
PTPRA-206ENST00000430705 FHL1Q13642 323 aa13.91□□□□□ -0.18
PTPRA-206ENST00000430705 LRRC23Q53EV4 343 aaPredicted RBP13.91□□□□□ -0.18
PTPRA-206ENST00000430705 RGS7BPQ6MZT1 257 aaPredicted RBP13.91□□□□□ -0.18
PTPRA-206ENST00000430705 HIST3H2AQ7L7L0 130 aa13.91□□□□□ -0.18
PTPRA-206ENST00000430705 SLC16A14Q7RTX9 510 aa13.91□□□□□ -0.18
PTPRA-206ENST00000430705 MEX3DQ86XN8 651 aaKnown RBP13.91□□□□□ -0.18
PTPRA-206ENST00000430705 LRRC18Q8N456 261 aa13.91□□□□□ -0.18
PTPRA-206ENST00000430705 CLDN22Q8N7P3 220 aa13.91□□□□□ -0.18
PTPRA-206ENST00000430705 CPEB3Q8NE35 698 aaKnown RBP13.91□□□□□ -0.18
PTPRA-206ENST00000430705 HIST1H2ACQ93077 130 aa13.91□□□□□ -0.18
PTPRA-206ENST00000430705 NARFLQ9H6Q4 476 aa13.91□□□□□ -0.18
PTPRA-206ENST00000430705 DUSP13Q9UII6 198 aa13.91□□□□□ -0.18
PTPRA-206ENST00000430705 A0A1W2PRG6 482 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 NPIPB13A6NJU9 1138 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 CENPBD1B2RD01 187 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 NPIPB4C9JG80 1138 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 MCIDASD6RGH6 385 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 FARS2O95363 451 aaKnown RBP13.9□□□□□ -0.18
PTPRA-206ENST00000430705 HNF1AP20823 631 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 KDELR2P33947 212 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 WNT5AP41221 380 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 GPR6P46095 362 aaPredicted RBP13.9□□□□□ -0.18
PTPRA-206ENST00000430705 DAP3P51398 398 aaKnown RBP13.9□□□□□ -0.18
PTPRA-206ENST00000430705 ARFIP2P53365 341 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 LAPTM4AQ15012 233 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 SLC36A2Q495M3 483 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 TMEM53Q6P2H8 277 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 ERICH5Q6P6B1 374 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 LRRC75AQ8NAA5 344 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 RBM15BQ8NDT2 890 aaKnown RBP13.9□□□□□ -0.18
PTPRA-206ENST00000430705 RDH5Q92781 318 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 SH3GL1Q99961 368 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 RNF121Q9H920 327 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 ZNF446Q9NWS9 450 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 CMTM6Q9NX76 183 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 TAAR3PQ9P1P4 343 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 HIF3AQ9Y2N7 669 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 SNX13Q9Y5W8 968 aa13.9□□□□□ -0.18
PTPRA-206ENST00000430705 LOC100653049A0A140TA62 436 aa13.89□□□□□ -0.19
PTPRA-206ENST00000430705 KRT34O76011 436 aa13.89□□□□□ -0.19
PTPRA-206ENST00000430705 NPPAP01160 153 aa13.89□□□□□ -0.19
PTPRA-206ENST00000430705 IGHMP01871 453 aa13.89□□□□□ -0.19
PTPRA-206ENST00000430705 THRBP10828 461 aa13.89□□□□□ -0.19
PTPRA-206ENST00000430705 ZNF32P17041 273 aa13.89□□□□□ -0.19
PTPRA-206ENST00000430705 MAKP20794 623 aa13.89□□□□□ -0.19
PTPRA-206ENST00000430705 DVL1P1P54792 670 aaPredicted RBP13.89□□□□□ -0.19
PTPRA-206ENST00000430705 MRPS11P82912 194 aaKnown RBP13.89□□□□□ -0.19
PTPRA-206ENST00000430705 MRPS34P82930 218 aaKnown RBP13.89□□□□□ -0.19
PTPRA-206ENST00000430705 MMEL1Q495T6 779 aa13.89□□□□□ -0.19
PTPRA-206ENST00000430705 PABPC1L2AQ5JQF8 200 aa13.89□□□□□ -0.19
PTPRA-206ENST00000430705 SLC25A47Q6Q0C1 308 aa13.89□□□□□ -0.19
PTPRA-206ENST00000430705 DPPA2Q7Z7J5 298 aa13.89□□□□□ -0.19
PTPRA-206ENST00000430705 MICU2Q8IYU8 434 aa13.89□□□□□ -0.19
PTPRA-206ENST00000430705 ZNF101Q8IZC7 436 aa13.89□□□□□ -0.19
PTPRA-206ENST00000430705 POU5F2Q8N7G0 328 aa13.89□□□□□ -0.19
PTPRA-206ENST00000430705 RCN3Q96D15 328 aa13.89□□□□□ -0.19
PTPRA-206ENST00000430705 PRRC1Q96M27 445 aa13.89□□□□□ -0.19
PTPRA-206ENST00000430705 C1orf198Q9H425 327 aa13.89□□□□□ -0.19
PTPRA-206ENST00000430705 CDH20Q9HBT6 801 aa13.89□□□□□ -0.19
PTPRA-206ENST00000430705 ARGLU1Q9NWB6 273 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms