RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 TMEM120BA0PK00 339 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 RAB19A4D1S5 217 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 ERVV-1B6SEH8 477 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 HCRTR1O43613 425 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 EIF4E2O60573 245 aaKnown RBP2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 NDUFS6O75380 124 aaKnown RBP2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 CBR3O75828 277 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 CCNB2O95067 398 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 CLIC3O95833 236 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 CD160O95971 181 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 IGKV3-15P01624 115 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 IGHV3-48P01763 117 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 IFNW1P05000 195 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 ALDOBP05062 364 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 FGF1P05230 155 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 TPM3P06753 285 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 DUX4L2P0CJ85 424 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 DUX4L3P0CJ86 424 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 DUX4L4P0CJ87 422 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 DUX4L5P0CJ88 424 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 DUX4L6P0CJ89 424 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 DUX4L7P0CJ90 424 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 CCDC166P0CW27 439 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 NR2C1P13056 603 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 PMCHP20382 165 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 GABRR2P28476 465 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 MDH2P40926 338 aaKnown RBP2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 AQP2P41181 271 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 SLC1A1P43005 524 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 NPBWR2P48146 333 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 CX3CR1P49238 355 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 PSMC5P62195 406 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 ACTA2P62736 377 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 ACTG2P63267 376 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 ACTC1P68032 377 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 ACTA1P68133 377 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 TGFBR3Q03167 851 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 CHRNB3Q05901 458 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 SLC10A7Q0GE19 358 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 GGTLC2Q14390 218 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 CYTH1Q15438 398 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 TIMM50Q3ZCQ8 353 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 PARP15Q460N3 678 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 OLFML2AQ68BL7 652 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 ULK3Q6PHR2 472 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 DUX4L9Q6RFH8 374 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 Q6ZN92 141 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 RFLNAQ6ZTI6 216 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 FRA10AC1Q70Z53 315 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 HDDC2Q7Z4H3 204 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 LHFPL3Q86UP9 236 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 LRRC8AQ8IWT6 810 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 SELENOHQ8IZQ5 122 aaKnown RBP2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 IQCKQ8N0W5 287 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 EID2Q8N6I1 236 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 PRELID2Q8N945 189 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 ZNF557Q8N988 423 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 TTC29Q8NA56 475 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 INO80EQ8NBZ0 244 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 OR10H4Q8NGA5 316 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 OR4D6Q8NGJ1 314 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 TFB1MQ8WVM0 346 aaKnown RBP2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 NEIL2Q969S2 332 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 MRGPRFQ96AM1 343 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 RPUSD4Q96CM3 377 aaKnown RBP2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 HSFY1Q96LI6 401 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 JSRP1Q96MG2 331 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 COL21A1Q96P44 957 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 OPALINQ96PE5 141 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 ZNF317Q96PQ6 595 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 CSPG4P5Q96PW8 444 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 XPO6Q96QU8 1125 aaKnown RBP2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 CYTH2Q99418 400 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 TSG101Q99816 390 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 LZTS2Q9BRK4 669 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 RANBP3Q9H6Z4 567 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 AGPAT4Q9NRZ5 378 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 IFNKQ9P0W0 207 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 DUX4Q9UBX2 424 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 ENPP5Q9UJA9 477 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 KLHL21Q9UJP4 597 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 ZNF229Q9UJW7 825 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 UGT2A1Q9Y4X1 527 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 RAI1Q7Z5J4 1906 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 ABCA7Q8IZY2 2146 aa2.18□□□□□ -2.06
HMGB1P9-201ENST00000429856 UBN2Q6ZU65 1347 aa2.17□□□□□ -2.06
HMGB1P9-201ENST00000429856 A0A087WWV3 80 aa2.17□□□□□ -2.06
HMGB1P9-201ENST00000429856 IGKV1D-13A0A0B4J2D9 117 aa2.17□□□□□ -2.06
HMGB1P9-201ENST00000429856 A8MUA0 341 aa2.17□□□□□ -2.06
HMGB1P9-201ENST00000429856 K7EMT4 169 aa2.17□□□□□ -2.06
HMGB1P9-201ENST00000429856 NDUFAB1O14561 156 aa2.17□□□□□ -2.06
HMGB1P9-201ENST00000429856 SLC9A3R1O14745 358 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P9-201ENST00000429856 SCAMP2O15127 329 aaKnown RBP2.17□□□□□ -2.06
HMGB1P9-201ENST00000429856 GPAA1O43292 621 aa2.17□□□□□ -2.06
HMGB1P9-201ENST00000429856 GMDSO60547 372 aa2.17□□□□□ -2.06
HMGB1P9-201ENST00000429856 NIPSNAP2O75323 286 aa2.17□□□□□ -2.06
HMGB1P9-201ENST00000429856 CDK14O94921 469 aa2.17□□□□□ -2.06
HMGB1P9-201ENST00000429856 HLA-HP01893 362 aa2.17□□□□□ -2.06
HMGB1P9-201ENST00000429856 SERPINA5P05154 406 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms