RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 ADAP2Q9NPF8 381 aa10.07□□□□□ -0.8
SEMA4D-209ENST00000429836 METTL1Q9UBP6 276 aaKnown RBP10.07□□□□□ -0.8
SEMA4D-209ENST00000429836 IL36AQ9UHA7 158 aa10.07□□□□□ -0.8
SEMA4D-209ENST00000429836 LRRK1Q38SD2 2015 aa10.07□□□□□ -0.8
SEMA4D-209ENST00000429836 TET1Q8NFU7 2136 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 A0A1B0GV90 55 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 DUXAA6NLW8 204 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 RNASEK-C17orf49H0YIS7 233 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 VAMP1P23763 118 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 CD1CP29017 333 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 CD80P33681 288 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 ID4P47928 161 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 FLT3LGP49771 235 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 TAS2R19P59542 299 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 SKP1P63208 163 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 CXADRP78310 365 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 HGFACQ04756 655 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 GGTLC2Q14390 218 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 ARHGAP11BQ3KRB8 267 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 TRMT12Q53H54 448 aaKnown RBP10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 OTPQ5XKR4 325 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 OR10K2Q6IF99 312 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 SHISA5Q8N114 240 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 C15orf54Q8N8G6 183 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 OR4K17Q8NGC6 315 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 GPX8Q8TED1 209 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 EDAQ92838 391 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 RHOVQ96L33 236 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 MRM2Q9UI43 246 aaKnown RBP10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 SERTAD3Q9UJW9 196 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 A0A1B0GWA3 101 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 A0A1W2PPH5 198 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 C5orf51A6NDU8 294 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 ST8SIA5O15466 376 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 CYBAP13498 195 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 RCC1P18754 421 aaPredicted RBP10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 AGAP20933 346 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 NME2P22392 152 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 SRSF4Q08170 494 aaKnown RBP10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 ALKBH1Q13686 389 aaKnown RBP10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 IRF4Q15306 451 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 Q3ZCU0 254 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 ZAR1Q86SH2 424 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 NPEPL1Q8NDH3 523 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 BHLHE23Q8NDY6 225 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 OR5K2Q8NHB8 316 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 RPS4Y2Q8TD47 263 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 ROBO4Q8WZ75 1007 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 FOXRED1Q96CU9 486 aaPredicted RBP10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 AKR1E2Q96JD6 320 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 TCEAL7Q9BRU2 100 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 C20orf24Q9BUV8 137 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 EGLN1Q9GZT9 426 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 SEC61A2Q9H9S3 476 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 CYTL1Q9NRR1 136 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 MSRAQ9UJ68 235 aa10.06□□□□□ -0.8
SEMA4D-209ENST00000429836 C17orf113A0A1B0GUU1 675 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 ZNF729A6NN14 1252 aaPredicted RBP10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 LATO43561 262 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 UPK3AO75631 287 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 ZNF735P0CB33 412 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 ERGP11308 486 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 NID1P14543 1247 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 PGDP52209 483 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 BTN3A2P78410 334 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 NTHL1P78549 312 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 SKP2Q13309 424 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 CLINT1Q14677 625 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 SLC39A5Q6ZMH5 540 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 ZNF561Q8N587 486 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 ZNF676Q8N7Q3 588 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 SLC30A7Q8NEW0 376 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 FAM3DQ96BQ1 224 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 NUS1Q96E22 293 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 SLC25A21Q9BQT8 299 aaPredicted RBP10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 GGACTQ9BVM4 153 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 ZNF350Q9GZX5 532 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 CHRDQ9H2X0 955 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 APOBEC3BQ9UH17 382 aaKnown RBP10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 IKZF2Q9UKS7 526 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 SLC27A6Q9Y2P4 619 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 TMED7Q9Y3B3 224 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 A0A1W2PRU2 124 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 TVP23AA6NH52 213 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 MSGN1A6NI15 193 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 F8VVB4 439 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 F8VWA3 439 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 GPR37O15354 613 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 SPINT1O43278 529 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 RDH16O75452 317 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 CD14P08571 375 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 SNRNP70P08621 437 aaKnown RBP10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 PBX2P40425 430 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 EIF2S3P41091 472 aaKnown RBP10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 GAS6Q14393 721 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 TCTN1Q2MV58 587 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 LPCAT3Q6P1A2 487 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 DHRS11Q6UWP2 260 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 IL34Q6ZMJ4 242 aa10.05□□□□□ -0.8
SEMA4D-209ENST00000429836 AMZ2Q86W34 360 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms