RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 DAP3P51398 398 aaKnown RBP14.64□□□□□ -0.07
TRIM39-209ENST00000428728 PIN1Q13526 163 aaPredicted RBP14.64□□□□□ -0.07
TRIM39-209ENST00000428728 TBC1D28Q2M2D7 210 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 SLC36A2Q495M3 483 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 LRRC23Q53EV4 343 aaPredicted RBP14.64□□□□□ -0.07
TRIM39-209ENST00000428728 RBM15BQ8NDT2 890 aaKnown RBP14.64□□□□□ -0.07
TRIM39-209ENST00000428728 OR8J3Q8NGG0 315 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 CLDND2Q8NHS1 167 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 TMEM239Q8WW34 195 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 RDH5Q92781 318 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 YIPF5Q969M3 257 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 TSPAN32Q96QS1 320 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 SH3GL1Q99961 368 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 LPAR2Q9HBW0 351 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 INIPQ9NRY2 104 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 ZNF275Q9NSD4 429 aaPredicted RBP14.64□□□□□ -0.07
TRIM39-209ENST00000428728 C20orf141Q9NUB4 165 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 TAAR3PQ9P1P4 343 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 TMEFF2Q9UIK5 374 aaPredicted RBP14.64□□□□□ -0.07
TRIM39-209ENST00000428728 RIMS3Q9UJD0 308 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 ZNF346Q9UL40 294 aaKnown RBP14.64□□□□□ -0.07
TRIM39-209ENST00000428728 IQCMA0A1B0GVH7 501 aa14.63□□□□□ -0.07
TRIM39-209ENST00000428728 PIP5K1CO60331 668 aa14.63□□□□□ -0.07
TRIM39-209ENST00000428728 TRMUO75648 421 aaKnown RBP14.63□□□□□ -0.07
TRIM39-209ENST00000428728 OR5F1O95221 314 aa14.63□□□□□ -0.07
TRIM39-209ENST00000428728 SLC2A10O95528 541 aa14.63□□□□□ -0.07
TRIM39-209ENST00000428728 TROVE2P10155 538 aaKnown RBP eCLIP14.63□□□□□ -0.07
TRIM39-209ENST00000428728 ACADSP16219 412 aa14.63□□□□□ -0.07
TRIM39-209ENST00000428728 ACHEP22303 614 aa14.63□□□□□ -0.07
TRIM39-209ENST00000428728 RBM34P42696 430 aaKnown RBP14.63□□□□□ -0.07
TRIM39-209ENST00000428728 KLF3P57682 345 aaPredicted RBP14.63□□□□□ -0.07
TRIM39-209ENST00000428728 HSF2Q03933 536 aa14.63□□□□□ -0.07
TRIM39-209ENST00000428728 KLF10Q13118 480 aa14.63□□□□□ -0.07
TRIM39-209ENST00000428728 TOP3AQ13472 1001 aaPredicted RBP14.63□□□□□ -0.07
TRIM39-209ENST00000428728 HIST3H3Q16695 136 aa14.63□□□□□ -0.07
TRIM39-209ENST00000428728 ERICH5Q6P6B1 374 aa14.63□□□□□ -0.07
TRIM39-209ENST00000428728 HDDC2Q7Z4H3 204 aa14.63□□□□□ -0.07
TRIM39-209ENST00000428728 MOSPD2Q8NHP6 518 aa14.63□□□□□ -0.07
TRIM39-209ENST00000428728 MRPL13Q9BYD1 178 aaKnown RBP14.63□□□□□ -0.07
TRIM39-209ENST00000428728 C1orf198Q9H425 327 aa14.63□□□□□ -0.07
TRIM39-209ENST00000428728 FGFR1OP2Q9NVK5 253 aa14.63□□□□□ -0.07
TRIM39-209ENST00000428728 SLC22A23A1A5C7 686 aa14.62□□□□□ -0.07
TRIM39-209ENST00000428728 BBIP1A8MTZ0 92 aa14.62□□□□□ -0.07
TRIM39-209ENST00000428728 WNT9BO14905 357 aa14.62□□□□□ -0.07
TRIM39-209ENST00000428728 PPIHO43447 177 aaKnown RBP14.62□□□□□ -0.07
TRIM39-209ENST00000428728 SASH3O75995 380 aa14.62□□□□□ -0.07
TRIM39-209ENST00000428728 H2AFXP16104 143 aaPredicted RBP14.62□□□□□ -0.07
TRIM39-209ENST00000428728 CDAP32320 146 aa14.62□□□□□ -0.07
TRIM39-209ENST00000428728 MAGEB1P43366 347 aa14.62□□□□□ -0.07
TRIM39-209ENST00000428728 DVL1P1P54792 670 aaPredicted RBP14.62□□□□□ -0.07
TRIM39-209ENST00000428728 SELENOVP59797 346 aa14.62□□□□□ -0.07
TRIM39-209ENST00000428728 GLO1Q04760 184 aa14.62□□□□□ -0.07
TRIM39-209ENST00000428728 PLP2Q04941 152 aa14.62□□□□□ -0.07
TRIM39-209ENST00000428728 FMODQ06828 376 aa14.62□□□□□ -0.07
TRIM39-209ENST00000428728 CD47Q08722 323 aa14.62□□□□□ -0.07
TRIM39-209ENST00000428728 DPPA2Q7Z7J5 298 aa14.62□□□□□ -0.07
TRIM39-209ENST00000428728 SYNPRQ8TBG9 265 aa14.62□□□□□ -0.07
TRIM39-209ENST00000428728 SNX33Q8WV41 574 aa14.62□□□□□ -0.07
TRIM39-209ENST00000428728 TPD52L3Q96J77 140 aa14.62□□□□□ -0.07
TRIM39-209ENST00000428728 MED31Q9Y3C7 131 aa14.62□□□□□ -0.07
TRIM39-209ENST00000428728 B4DSR2 109 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 CDC14BO60729 498 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 SNAP29O95721 258 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 PTHP01270 115 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 IFNA14P01570 189 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 CCNOP22674 350 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 APLNRP35414 380 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 ARFIP2P53365 341 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 CCL8P80075 99 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 MAPRE2Q15555 327 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 NRN1LQ496H8 165 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 CYBRD1Q53TN4 286 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 COQ5Q5HYK3 327 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 TMEM154Q6P9G4 183 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 UGT2A3Q6UWM9 527 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 GLCCI1Q86VQ1 547 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 OR1J2Q8NGS2 313 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 C10orf82Q8WW14 230 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 NSMAFQ92636 917 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 GTF3AQ92664 365 aaKnown RBP14.61□□□□□ -0.07
TRIM39-209ENST00000428728 HDAC2Q92769 488 aaKnown RBP14.61□□□□□ -0.07
TRIM39-209ENST00000428728 C1orf159Q96HA4 380 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 ZNF583Q96ND8 569 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 SEPHS2Q99611 448 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 POLR2J2Q9GZM3 115 aaKnown RBP14.61□□□□□ -0.07
TRIM39-209ENST00000428728 POLR2J3Q9H1A7 115 aaKnown RBP14.61□□□□□ -0.07
TRIM39-209ENST00000428728 LRMDAQ9H2I8 198 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 CCNB1IP1Q9NPC3 277 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 HINT3Q9NQE9 182 aaKnown RBP14.61□□□□□ -0.07
TRIM39-209ENST00000428728 TREM2Q9NZC2 230 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 GPR160Q9UJ42 338 aa14.61□□□□□ -0.07
TRIM39-209ENST00000428728 IGKV1D-43A0A0B4J1Z2 117 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 C17orf100A8MU93 164 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 FAM220BPB1ANY3 271 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 CENPBD1B2RD01 187 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 FAM157AC9JC47 383 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 RP2O75695 350 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 MMP7P09237 267 aaPredicted RBP14.6□□□□□ -0.07
TRIM39-209ENST00000428728 ZNF250P15622 560 aa14.6□□□□□ -0.07
TRIM39-209ENST00000428728 UCP2P55851 309 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms