RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 NR2C1P13056 603 aa12.75□□□□□ -0.37
SGCE-204ENST00000428696 HIST1H1CP16403 213 aaKnown RBP12.75□□□□□ -0.37
SGCE-204ENST00000428696 CRYGSP22914 178 aa12.75□□□□□ -0.37
SGCE-204ENST00000428696 CDKN2AP42771 156 aaKnown RBP12.75□□□□□ -0.37
SGCE-204ENST00000428696 DAZAP2Q15038 168 aaPredicted RBP12.75□□□□□ -0.37
SGCE-204ENST00000428696 MESTQ5EB52 335 aa12.75□□□□□ -0.37
SGCE-204ENST00000428696 FAM122BQ7Z309 247 aa12.75□□□□□ -0.37
SGCE-204ENST00000428696 IQCF1Q8N6M8 205 aa12.75□□□□□ -0.37
SGCE-204ENST00000428696 NMNAT3Q96T66 252 aa12.75□□□□□ -0.37
SGCE-204ENST00000428696 SYT4Q9H2B2 425 aa12.75□□□□□ -0.37
SGCE-204ENST00000428696 KCNN2Q9H2S1 579 aa12.75□□□□□ -0.37
SGCE-204ENST00000428696 CLEC4MQ9H2X3 399 aaPredicted RBP12.75□□□□□ -0.37
SGCE-204ENST00000428696 ESRP2Q9H6T0 727 aaKnown RBP12.75□□□□□ -0.37
SGCE-204ENST00000428696 RNF121Q9H920 327 aa12.75□□□□□ -0.37
SGCE-204ENST00000428696 PAPOLBQ9NRJ5 636 aaKnown RBP12.75□□□□□ -0.37
SGCE-204ENST00000428696 OAZ3Q9UMX2 235 aa12.75□□□□□ -0.37
SGCE-204ENST00000428696 AMDHD2Q9Y303 409 aa12.75□□□□□ -0.37
SGCE-204ENST00000428696 SLC25A15Q9Y619 301 aa12.75□□□□□ -0.37
SGCE-204ENST00000428696 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.74□□□□□ -0.37
SGCE-204ENST00000428696 ARRDC5A6NEK1 342 aa12.74□□□□□ -0.37
SGCE-204ENST00000428696 PATE4P0C8F1 98 aa12.74□□□□□ -0.37
SGCE-204ENST00000428696 OR8G3PP0DMU2 310 aa12.74□□□□□ -0.37
SGCE-204ENST00000428696 DAPP51397 102 aa12.74□□□□□ -0.37
SGCE-204ENST00000428696 DBPQ10586 325 aaPredicted RBP12.74□□□□□ -0.37
SGCE-204ENST00000428696 NPRL3Q12980 569 aa12.74□□□□□ -0.37
SGCE-204ENST00000428696 GINS1Q14691 196 aa12.74□□□□□ -0.37
SGCE-204ENST00000428696 HIST3H3Q16695 136 aa12.74□□□□□ -0.37
SGCE-204ENST00000428696 BEX5Q5H9J7 111 aa12.74□□□□□ -0.37
SGCE-204ENST00000428696 SVOPLQ8N434 492 aa12.74□□□□□ -0.37
SGCE-204ENST00000428696 C17orf78Q8N4C9 275 aa12.74□□□□□ -0.37
SGCE-204ENST00000428696 SLC22A24Q8N4F4 322 aa12.74□□□□□ -0.37
SGCE-204ENST00000428696 SDR9C7Q8NEX9 313 aa12.74□□□□□ -0.37
SGCE-204ENST00000428696 OR2T33Q8NG76 320 aa12.74□□□□□ -0.37
SGCE-204ENST00000428696 OR8D4Q8NGM9 314 aa12.74□□□□□ -0.37
SGCE-204ENST00000428696 RADILQ96JH8 1075 aa12.74□□□□□ -0.37
SGCE-204ENST00000428696 GPX7Q96SL4 187 aaPredicted RBP12.74□□□□□ -0.37
SGCE-204ENST00000428696 KRT84Q9NSB2 600 aa12.74□□□□□ -0.37
SGCE-204ENST00000428696 IL20Q9NYY1 176 aa12.74□□□□□ -0.37
SGCE-204ENST00000428696 ANKHD1Q8IWZ3 2542 aaKnown RBP12.74□□□□□ -0.37
SGCE-204ENST00000428696 IGKV1D-43A0A0B4J1Z2 117 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 FAM171A2A8MVW0 826 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 CENPBD1B2RD01 187 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 IDH3BO43837 385 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 MITFO75030 526 aaPredicted RBP12.73□□□□□ -0.37
SGCE-204ENST00000428696 CTAG2O75638 210 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 OSMP13725 252 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.73□□□□□ -0.37
SGCE-204ENST00000428696 ETFDHQ16134 617 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 TMEM236Q5W0B7 351 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 SLC25A47Q6Q0C1 308 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 CD300LDQ6UXZ3 194 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 PTCHD4Q6ZW05 846 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 ZNF771Q7L3S4 317 aaPredicted RBP12.73□□□□□ -0.37
SGCE-204ENST00000428696 ADCK1Q86TW2 530 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 SKA3Q8IX90 412 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 CYB561A3Q8NBI2 242 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 OR4Q3Q8NH05 313 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 FNDC8Q8TC99 324 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 C14orf79Q96F83 325 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 TSSK2Q96PF2 358 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 CIB1Q99828 191 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 NUAK2Q9H093 628 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 FN3KQ9H479 309 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 RPRD1BQ9NQG5 326 aaKnown RBP12.73□□□□□ -0.37
SGCE-204ENST00000428696 RASSF1Q9NS23 344 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 TMEM38BQ9NVV0 291 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 REV1Q9UBZ9 1251 aa12.73□□□□□ -0.37
SGCE-204ENST00000428696 DEFB108AA8MXU0 73 aa12.72□□□□□ -0.37
SGCE-204ENST00000428696 ARPC3O15145 178 aa12.72□□□□□ -0.37
SGCE-204ENST00000428696 KHDRBS3O75525 346 aaKnown RBP12.72□□□□□ -0.37
SGCE-204ENST00000428696 HLA-DQA2P01906 255 aa12.72□□□□□ -0.37
SGCE-204ENST00000428696 CD3EP07766 207 aa12.72□□□□□ -0.37
SGCE-204ENST00000428696 APEHP13798 732 aaKnown RBP12.72□□□□□ -0.37
SGCE-204ENST00000428696 PTDSS1P48651 473 aaKnown RBP12.72□□□□□ -0.37
SGCE-204ENST00000428696 NR1H2P55055 460 aa12.72□□□□□ -0.37
SGCE-204ENST00000428696 BSPH1Q075Z2 132 aa12.72□□□□□ -0.37
SGCE-204ENST00000428696 OTPQ5XKR4 325 aa12.72□□□□□ -0.37
SGCE-204ENST00000428696 TMEM108Q6UXF1 575 aa12.72□□□□□ -0.37
SGCE-204ENST00000428696 SLC16A14Q7RTX9 510 aa12.72□□□□□ -0.37
SGCE-204ENST00000428696 MDP1Q86V88 176 aa12.72□□□□□ -0.37
SGCE-204ENST00000428696 NANOS1Q8WY41 292 aaKnown RBP12.72□□□□□ -0.37
SGCE-204ENST00000428696 PLEKHA8Q96JA3 519 aa12.72□□□□□ -0.37
SGCE-204ENST00000428696 HS3ST6Q96QI5 342 aa12.72□□□□□ -0.37
SGCE-204ENST00000428696 KCNS3Q9BQ31 491 aa12.72□□□□□ -0.37
SGCE-204ENST00000428696 TEX12Q9BXU0 123 aa12.72□□□□□ -0.37
SGCE-204ENST00000428696 CCNB1IP1Q9NPC3 277 aa12.72□□□□□ -0.37
SGCE-204ENST00000428696 NPAP1Q9NZP6 1156 aa12.72□□□□□ -0.37
SGCE-204ENST00000428696 POU2F3Q9UKI9 436 aa12.72□□□□□ -0.37
SGCE-204ENST00000428696 COA3Q9Y2R0 106 aaPredicted RBP12.72□□□□□ -0.37
SGCE-204ENST00000428696 SETXQ7Z333 2677 aaKnown RBP12.72□□□□□ -0.37
SGCE-204ENST00000428696 DPRXA6NFQ7 191 aa12.71□□□□□ -0.37
SGCE-204ENST00000428696 RIIAD1A6NNX1 92 aa12.71□□□□□ -0.37
SGCE-204ENST00000428696 BHLHE40O14503 412 aa12.71□□□□□ -0.37
SGCE-204ENST00000428696 SIAH2O43255 324 aa12.71□□□□□ -0.37
SGCE-204ENST00000428696 AHCYL1O43865 530 aa12.71□□□□□ -0.37
SGCE-204ENST00000428696 TXNDC12O95881 172 aa12.71□□□□□ -0.37
SGCE-204ENST00000428696 IFNGP01579 166 aa12.71□□□□□ -0.37
SGCE-204ENST00000428696 HRGP04196 525 aa12.71□□□□□ -0.37
SGCE-204ENST00000428696 HOXB1P14653 301 aaPredicted RBP12.71□□□□□ -0.37
SGCE-204ENST00000428696 CTLA4P16410 223 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms