RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 NFATC3Q12968 1075 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 DPY19L2P2Q6ZN68 376 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 ZNF836Q6ZNA1 936 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 LSMEM2Q8N112 164 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 OR5AS1Q8N127 324 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 LMNTD1Q8N9Z9 388 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 SEMA6DQ8NFY4 1073 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 FAM213BQ8TBF2 198 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 SMAP2Q8WU79 429 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-208ENST00000428599 LINC01599Q8WXQ3 324 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 ELSPBP1Q96BH3 223 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 GORASP2Q9H8Y8 452 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 CLEC1BQ9P126 229 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 USP22Q9UPT9 525 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 TMEM72A0PK05 275 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 ARNTLO00327 626 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 SH2D1BO14796 132 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 MT-ATP6P00846 226 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 PRKACAP17612 351 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 FOXA1P55317 472 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 RAB35Q15286 201 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 PRAMEF5Q5TYX0 476 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 PRAMEF6Q5VXH4 476 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 MBOAT2Q6ZWT7 520 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 CBLL1Q75N03 491 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 BTLAQ7Z6A9 289 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 MARCH3Q86UD3 253 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 NKAIN3Q8N8D7 197 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 OR2AE1Q8NHA4 323 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 M1APQ8TC57 530 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 SLC35A4Q96G79 324 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 CLMPQ9H6B4 373 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 NRIP3Q9NQ35 241 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 NPFFR2Q9Y5X5 522 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 KIR2DS1A0A191URI9 304 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 SGCEO43556 437 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 ANGPTL7O43827 346 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 IMPA1P29218 277 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 ZNF93P35789 620 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-208ENST00000428599 SRP14P37108 136 aaKnown RBP8.23□□□□□ -1.09
CTNND1-208ENST00000428599 APOBEC1P41238 236 aaKnown RBP8.23□□□□□ -1.09
CTNND1-208ENST00000428599 KIR2DS4P43632 304 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 SEMA3BQ13214 749 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 KIR2DS1Q14954 304 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 GPR19Q15760 415 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 ZNF77Q15935 545 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 TAF9Q16594 264 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 C9orf50Q5SZB4 431 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 ADGRG3Q86Y34 549 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 LINC00346Q8IVM7 164 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 UBAC2Q8NBM4 344 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 WFDC5Q8TCV5 224 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 PIGTQ969N2 578 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 TXLNGYQ9BZA5 131 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 OSGIN2Q9Y236 505 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 GABRPO00591 440 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 DFFBO76075 338 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 HNRNPFP52597 415 aaKnown RBP8.23□□□□□ -1.09
CTNND1-208ENST00000428599 Q499Y3 187 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 RFLNAQ6ZTI6 216 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 TSEN54Q7Z6J9 526 aaKnown RBP8.23□□□□□ -1.09
CTNND1-208ENST00000428599 SLC30A7Q8NEW0 376 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 OR4F15Q8NGB8 312 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 BCL7CQ8WUZ0 217 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-208ENST00000428599 SLC39A7Q92504 469 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 NT5DC2Q9H857 520 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 XKRY2A2RUG3 117 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 SLC16A6O15403 523 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 OIP5O43482 229 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 EIF4E2O60573 245 aaKnown RBP8.23□□□□□ -1.09
CTNND1-208ENST00000428599 SSTR4P31391 388 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 NHSL2Q5HYW2 709 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 WDR88Q6ZMY6 472 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 H1FNTQ75WM6 255 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-208ENST00000428599 SIRT6Q8N6T7 355 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 OR10G3Q8NGC4 313 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 ARPC5LQ9BPX5 153 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 EDEM2Q9BV94 578 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 ZDHHC5Q9C0B5 715 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 SPACA1Q9HBV2 294 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 SLC22A11Q9NSA0 550 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 RCE1Q9Y256 329 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 HS3ST1O14792 307 aa8.22□□□□□ -1.09
CTNND1-208ENST00000428599 GALR2O43603 387 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-208ENST00000428599 NSA2O95478 260 aaKnown RBP8.22□□□□□ -1.09
CTNND1-208ENST00000428599 CPEP16870 476 aa8.22□□□□□ -1.09
CTNND1-208ENST00000428599 KIAA1024LP59773 190 aa8.22□□□□□ -1.09
CTNND1-208ENST00000428599 SORDQ00796 357 aa8.22□□□□□ -1.09
CTNND1-208ENST00000428599 MEP1BQ16820 701 aa8.22□□□□□ -1.09
CTNND1-208ENST00000428599 NCCRP1Q6ZVX7 275 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-208ENST00000428599 OR13H1Q8NG92 308 aa8.22□□□□□ -1.09
CTNND1-208ENST00000428599 ZNRF4Q8WWF5 429 aa8.22□□□□□ -1.09
CTNND1-208ENST00000428599 ZNF331Q9NQX6 463 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-208ENST00000428599 ARAP2Q8WZ64 1704 aa8.22□□□□□ -1.09
CTNND1-208ENST00000428599 MYO18AQ92614 2054 aaKnown RBP8.22□□□□□ -1.09
CTNND1-208ENST00000428599 RAB19A4D1S5 217 aa8.22□□□□□ -1.09
CTNND1-208ENST00000428599 ARPC3O15145 178 aa8.22□□□□□ -1.09
CTNND1-208ENST00000428599 PLRG1O43660 514 aaKnown RBP8.22□□□□□ -1.09
CTNND1-208ENST00000428599 MAP2K6P52564 334 aa8.22□□□□□ -1.09
CTNND1-208ENST00000428599 EMP3P54852 163 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms