RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 NMNAT2Q9BZQ4 307 aa13.59□□□□□ -0.23
COL11A1-204ENST00000427239 SRA1Q9HD15 236 aaKnown RBP13.59□□□□□ -0.23
COL11A1-204ENST00000427239 KCNJ16Q9NPI9 418 aa13.59□□□□□ -0.23
COL11A1-204ENST00000427239 RPRD1BQ9NQG5 326 aaKnown RBP13.59□□□□□ -0.23
COL11A1-204ENST00000427239 FKBP7Q9Y680 259 aa13.59□□□□□ -0.23
COL11A1-204ENST00000427239 ADGRG4Q8IZF6 3080 aa13.58□□□□□ -0.24
COL11A1-204ENST00000427239 PCNX1Q96RV3 2341 aa13.58□□□□□ -0.24
COL11A1-204ENST00000427239 PRKYO43930 277 aa13.58□□□□□ -0.24
COL11A1-204ENST00000427239 ZNF84P51523 738 aa13.58□□□□□ -0.24
COL11A1-204ENST00000427239 SH3BGRP55822 239 aaPredicted RBP13.58□□□□□ -0.24
COL11A1-204ENST00000427239 SNRPGP62308 76 aaKnown RBP13.58□□□□□ -0.24
COL11A1-204ENST00000427239 SLC25A30Q5SVS4 291 aa13.58□□□□□ -0.24
COL11A1-204ENST00000427239 SLC25A47Q6Q0C1 308 aa13.58□□□□□ -0.24
COL11A1-204ENST00000427239 CPOQ8IVL8 374 aa13.58□□□□□ -0.24
COL11A1-204ENST00000427239 OR6V1Q8N148 313 aa13.58□□□□□ -0.24
COL11A1-204ENST00000427239 FAM26EQ8N5C1 309 aa13.58□□□□□ -0.24
COL11A1-204ENST00000427239 SETD9Q8NE22 299 aa13.58□□□□□ -0.24
COL11A1-204ENST00000427239 ITLN2Q8WWU7 325 aaPredicted RBP13.58□□□□□ -0.24
COL11A1-204ENST00000427239 ALKBH3Q96Q83 286 aaPredicted RBP13.58□□□□□ -0.24
COL11A1-204ENST00000427239 RBM24Q9BX46 236 aaKnown RBP13.58□□□□□ -0.24
COL11A1-204ENST00000427239 TAS2R16Q9NYV7 291 aa13.58□□□□□ -0.24
COL11A1-204ENST00000427239 B9D1Q9UPM9 204 aa13.58□□□□□ -0.24
COL11A1-204ENST00000427239 GPR52Q9Y2T5 361 aa13.58□□□□□ -0.24
COL11A1-204ENST00000427239 HSPE1-MOB4S4R3N1 261 aa13.58□□□□□ -0.24
COL11A1-204ENST00000427239 WIPF3A6NGB9 483 aa13.57□□□□□ -0.24
COL11A1-204ENST00000427239 ZNF99A8MXY4 864 aaPredicted RBP13.57□□□□□ -0.24
COL11A1-204ENST00000427239 KHDRBS3O75525 346 aaKnown RBP13.57□□□□□ -0.24
COL11A1-204ENST00000427239 CENPAP49450 140 aa13.57□□□□□ -0.24
COL11A1-204ENST00000427239 ASCL1P50553 236 aa13.57□□□□□ -0.24
COL11A1-204ENST00000427239 FMODQ06828 376 aa13.57□□□□□ -0.24
COL11A1-204ENST00000427239 CEACAM16Q2WEN9 425 aa13.57□□□□□ -0.24
COL11A1-204ENST00000427239 FBXL19-AS1Q494R0 122 aa13.57□□□□□ -0.24
COL11A1-204ENST00000427239 ZNF691Q5VV52 312 aa13.57□□□□□ -0.24
COL11A1-204ENST00000427239 PLBD1Q6P4A8 553 aa13.57□□□□□ -0.24
COL11A1-204ENST00000427239 ZNF627Q7L945 461 aa13.57□□□□□ -0.24
COL11A1-204ENST00000427239 LINGO2Q7L985 606 aa13.57□□□□□ -0.24
COL11A1-204ENST00000427239 CXXC5Q7LFL8 322 aaKnown RBP13.57□□□□□ -0.24
COL11A1-204ENST00000427239 RHOXF1Q8NHV9 184 aa13.57□□□□□ -0.24
COL11A1-204ENST00000427239 MUS81Q96NY9 551 aa13.57□□□□□ -0.24
COL11A1-204ENST00000427239 IL4I1Q96RQ9 567 aa13.57□□□□□ -0.24
COL11A1-204ENST00000427239 RACGAP1Q9H0H5 632 aa13.57□□□□□ -0.24
COL11A1-204ENST00000427239 H2AFY2Q9P0M6 372 aaPredicted RBP13.57□□□□□ -0.24
COL11A1-204ENST00000427239 RAB26Q9ULW5 256 aa13.57□□□□□ -0.24
COL11A1-204ENST00000427239 MOKQ9UQ07 419 aa13.57□□□□□ -0.24
COL11A1-204ENST00000427239 FAM183AA6NL82 134 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 PRODHO43272 600 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 AGFG2O95081 481 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 CLDN14O95500 239 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 CTLA4P16410 223 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 COX5AP20674 150 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 BLVRAP53004 296 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 GLO1Q04760 184 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 NRN1LQ496H8 165 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 SFRP5Q5T4F7 317 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 C6orf52Q5T4I8 152 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 MEDAGQ5VYS4 303 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 NXNL2Q5VZ03 156 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 OR7E24Q6IFN5 339 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 USP51Q70EK9 711 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 GLB1L2Q8IW92 636 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 OTULINQ96BN8 352 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 ZNF837Q96EG3 531 aaPredicted RBP13.56□□□□□ -0.24
COL11A1-204ENST00000427239 BOD1Q96IK1 185 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 TSSK2Q96PF2 358 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 USB1Q9BQ65 265 aaKnown RBP13.56□□□□□ -0.24
COL11A1-204ENST00000427239 RERGLQ9H628 205 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 HINT3Q9NQE9 182 aaKnown RBP13.56□□□□□ -0.24
COL11A1-204ENST00000427239 DIDO1Q9BTC0 2240 aaKnown RBP13.56□□□□□ -0.24
COL11A1-204ENST00000427239 NCOA6Q14686 2063 aaPredicted RBP13.56□□□□□ -0.24
COL11A1-204ENST00000427239 PYCARD-AS1I3L0S3 204 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 DCTN6O00399 190 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 SPI1P17947 270 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 NPR2P20594 1047 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 PSMB1P20618 241 aaKnown RBP13.56□□□□□ -0.24
COL11A1-204ENST00000427239 IGHV1-2P23083 117 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 CD79BP40259 229 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 ENTHD1Q8IYW4 607 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 C8orf59Q8N0T1 100 aaPredicted RBP13.56□□□□□ -0.24
COL11A1-204ENST00000427239 ZNF433Q8N7K0 673 aaPredicted RBP13.56□□□□□ -0.24
COL11A1-204ENST00000427239 NSMAFQ92636 917 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 UBE2FQ969M7 185 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 Q96MT0 163 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 FOXB1Q99853 325 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 ZNF226Q9NYT6 803 aa13.56□□□□□ -0.24
COL11A1-204ENST00000427239 FREM1Q5H8C1 2179 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 IGLV1-36A0A0B4J1U3 117 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 IGKV1D-43A0A0B4J1Z2 117 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 CIB4A0PJX0 185 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 SNTNA6NMZ2 147 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 CLIC3O95833 236 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 ITGA5P08648 1049 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 GNAO1P09471 354 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 PAX7P23759 505 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 LAP3P28838 519 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 ISL1P61371 349 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 MRPS34P82930 218 aaKnown RBP13.55□□□□□ -0.24
COL11A1-204ENST00000427239 ARF1P84077 181 aaKnown RBP13.55□□□□□ -0.24
COL11A1-204ENST00000427239 IL5RAQ01344 420 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 ETFDHQ16134 617 aa13.55□□□□□ -0.24
COL11A1-204ENST00000427239 OCLNQ16625 522 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms