RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 HTR4Q13639 388 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 TCEAL7Q9BRU2 100 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 RBFOX1Q9NWB1 397 aaKnown RBP16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 SLC5A10A0PJK1 596 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 TMEM202A6NGA9 273 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 ELK1P19419 428 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 CPEB2Q7Z5Q1 589 aaKnown RBP16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 OR5AS1Q8N127 324 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 KDM8Q8N371 416 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 FAM109AQ8N4B1 249 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 SLC35A4Q96G79 324 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 STACQ99469 402 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 WASH6PQ9NQA3 447 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 LINC01553A4QN01 128 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 APH1AQ96BI3 265 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 LYRM4Q9HD34 91 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 SMCO4Q9NRQ5 59 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 A0A1W2PPH5 198 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 H7C1Q1 480 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 EPHA5P54756 1037 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 ADGRF3Q8IZF5 1079 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 CGGBP1Q9UFW8 167 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 PURGQ9UJV8 347 aaKnown RBP16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 SSUH2Q9Y2M2 353 aa16.5■□□□□ 0.23
ARHGEF28-203ENST00000426542 GPR171O14626 319 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 RGS11O94810 467 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 ABLIM3O94929 683 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 TEAD1P28347 426 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 P2RX1P51575 399 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 C9orf152Q5JTZ5 239 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 GDPD3Q7L5L3 318 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 ANGPTL5Q86XS5 388 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 TMEM174Q8WUU8 243 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 MT-ATP6P00846 226 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 TEKQ02763 1124 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 CDONQ4KMG0 1287 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 SLC16A6O15403 523 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 KIAA1024LP59773 190 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 IAH1Q2TAA2 248 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 ZMAT1Q5H9K5 638 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 TEX37Q96LM6 180 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 BARHL1Q9BZE3 327 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 UBQLN3Q9H347 655 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 HEYLQ9NQ87 328 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 PRPH2P23942 346 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 ARHGAP11BQ3KRB8 267 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 ADPRMQ3LIE5 342 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 GRINAQ7Z429 371 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 CELF2-AS1Q8N7Q2 184 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 SLC37A2Q8TED4 501 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 NPAP1Q9NZP6 1156 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 E9PI62 339 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 OR10J4P0C629 311 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 RPL27P61353 136 aaKnown RBP16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 DUSP5Q16690 384 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 PELI3Q8N2H9 469 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 SEMA6DQ8NFY4 1073 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 Q96M85 177 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 C11orf54Q9H0W9 315 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 SCN11AQ9UI33 1791 aa16.49■□□□□ 0.23
ARHGEF28-203ENST00000426542 IGLV3-10A0A075B6K4 115 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 SOCS7O14512 581 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 MMP11P24347 488 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 DMWDQ09019 674 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 PRTGQ2VWP7 1150 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 METRNLQ641Q3 311 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 CATSPERDQ86XM0 798 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 OR6M1Q8NGM8 313 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 OR13F1Q8NGS4 319 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 OR1E3Q8WZA6 343 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 CCDC74AQ96AQ1 378 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 INTS12Q96CB8 462 aaKnown RBP16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 BOD1Q96IK1 185 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 GPR85P60893 370 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 RPL11P62913 178 aaKnown RBP16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 HMGN3Q15651 99 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 C6orf15Q6UXA7 325 aaPredicted RBP16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 RBM45Q8IUH3 476 aaKnown RBP16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 HPSE2Q8WWQ2 592 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 ARV1Q9H2C2 271 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 BANF2Q9H503 90 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 PATZ1Q9HBE1 687 aaKnown RBP16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 CNR1P21554 472 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 HOXD11P31277 338 aaPredicted RBP16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 ADPRHP54922 357 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 TRMT12Q53H54 448 aaKnown RBP16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 OR52N1Q8NH53 320 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 GPR173Q9NS66 373 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 PTTG3PQ9NZH4 202 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 PIGAP37287 484 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 PRSS45Q7RTY3 260 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 GCNT2Q8N0V5 402 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 KIRREL1Q96J84 757 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 NTNG1Q9Y2I2 539 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 TRDV1A0A1B0GX56 115 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 H0Y8G0 127 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 ECI1P42126 302 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 FCN2Q15485 313 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 SLC43A2Q8N370 569 aa16.48■□□□□ 0.23
ARHGEF28-203ENST00000426542 SIRT6Q8N6T7 355 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms