RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 PFDN2Q9UHV9 154 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 B9D1Q9UPM9 204 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 SESN1Q9Y6P5 492 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 TMEM150CB9EJG8 249 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 THBS1P07996 1170 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 NFYAP23511 347 aaPredicted RBP12.13□□□□□ -0.47
USP42-203ENST00000426246 PUDPQ08623 228 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 UBE2NLQ5JXB2 153 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 DCAF12L2Q5VW00 463 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 NPEPL1Q8NDH3 523 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 JSRP1Q96MG2 331 aaPredicted RBP12.13□□□□□ -0.47
USP42-203ENST00000426246 PRDM6Q9NQX0 595 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 MRPS18AQ9NVS2 196 aaKnown RBP12.13□□□□□ -0.47
USP42-203ENST00000426246 FRRS1LQ9P0K9 344 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 GSKIPQ9P0R6 139 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 SCP2D1Q9UJQ7 156 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 ICOSLGO75144 302 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 FOSL2P15408 326 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 M6PRP20645 277 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 PLAURQ03405 335 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 SLC25A30Q5SVS4 291 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 OR52W1Q6IF63 320 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 RPL13AP3Q6NVV1 102 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 TRILQ7L0X0 811 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 TSTD1Q8NFU3 115 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 OR51A2Q8NGJ7 313 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 MAFIPQ8WZ33 124 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 SLC25A44Q96H78 314 aaPredicted RBP12.12□□□□□ -0.47
USP42-203ENST00000426246 LINC00052Q96N35 136 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 COMMD9Q9P000 198 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 ABRACLQ9P1F3 81 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 BAIAP2Q9UQB8 552 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 ZNF337Q9Y3M9 751 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 ENTPD2Q9Y5L3 495 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 ROS1P08922 2347 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 DIDO1Q9BTC0 2240 aaKnown RBP12.12□□□□□ -0.47
USP42-203ENST00000426246 RHPN2P1A8MT19 583 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 ZNF823P16415 610 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 SLC2A5P22732 501 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 NUP62P37198 522 aaPredicted RBP12.12□□□□□ -0.47
USP42-203ENST00000426246 UBE2IP63279 158 aaKnown RBP12.12□□□□□ -0.47
USP42-203ENST00000426246 SMIM4Q8WVI0 70 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 SCMH1Q96GD3 660 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 TINAGL1Q9GZM7 467 aaPredicted RBP12.12□□□□□ -0.47
USP42-203ENST00000426246 ANKRD19PQ9H560 264 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 TMEM184BQ9Y519 407 aaPredicted RBP12.12□□□□□ -0.47
USP42-203ENST00000426246 NPFFR2Q9Y5X5 522 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 G3V3Y1 287 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 SLC33A1O00400 549 aaPredicted RBP12.12□□□□□ -0.47
USP42-203ENST00000426246 KLF4O43474 513 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 LMX1BO60663 402 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 CALCBP10092 127 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 PRSS3P35030 304 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 PLCXD2Q0VAA5 305 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 ALKBH1Q13686 389 aaKnown RBP12.12□□□□□ -0.47
USP42-203ENST00000426246 Q499Y3 187 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 CD276Q5ZPR3 534 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 IDO2Q6ZQW0 420 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 FGF11Q92914 225 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 SLC25A38Q96DW6 304 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 RBP7Q96R05 134 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 INTS14Q96SY0 518 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 GSX2Q9BZM3 304 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 PARP12Q9H0J9 701 aaKnown RBP12.12□□□□□ -0.47
USP42-203ENST00000426246 ISYNA1Q9NPH2 558 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 AKAP7Q9P0M2 348 aaPredicted RBP12.12□□□□□ -0.47
USP42-203ENST00000426246 DHDHQ9UQ10 334 aa12.12□□□□□ -0.47
USP42-203ENST00000426246 PRAMEF2O60811 474 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 RP2O75695 350 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 SLC35E2P0CK97 266 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 ADRA2CP18825 462 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 SFTPDP35247 375 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 FAM181AQ8N9Y4 354 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 NR4A3Q92570 626 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 TAS2R3Q9NYW6 316 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 CKLFQ9UBR5 152 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 MRM2Q9UI43 246 aaKnown RBP12.11□□□□□ -0.47
USP42-203ENST00000426246 POLEQ07864 2286 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 CPED1A4D0V7 1026 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 P2RY10O00398 339 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 HTR3BO95264 441 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 RAB3DO95716 219 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 HLA-DQB1P01920 261 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 DCNP07585 359 aaKnown RBP12.11□□□□□ -0.47
USP42-203ENST00000426246 CSNK1EP49674 416 aaKnown RBP12.11□□□□□ -0.47
USP42-203ENST00000426246 TNK1Q13470 666 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 METTL11BQ5VVY1 283 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 BEST3Q8N1M1 668 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 C19orf47Q8N9M1 422 aaKnown RBP12.11□□□□□ -0.47
USP42-203ENST00000426246 TAAR8Q969N4 342 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 TAS2R4Q9NYW5 299 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 VSX1Q9NZR4 365 aaPredicted RBP12.11□□□□□ -0.47
USP42-203ENST00000426246 RPH3AQ9Y2J0 694 aaPredicted RBP12.11□□□□□ -0.47
USP42-203ENST00000426246 COA3Q9Y2R0 106 aaPredicted RBP12.11□□□□□ -0.47
USP42-203ENST00000426246 PCNX3Q9H6A9 2034 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 CACNA1DQ01668 2161 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 A0A1W2PR77 199 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 ZNF217O75362 1048 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 PTP4A3O75365 173 aa12.11□□□□□ -0.47
USP42-203ENST00000426246 UTS2O95399 124 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms