RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 KLHDC3Q9BQ90 382 aa4.62□□□□□ -1.67
VPS8-205ENST00000424721 CHCHD6Q9BRQ6 235 aa4.62□□□□□ -1.67
VPS8-205ENST00000424721 TMEM109Q9BVC6 243 aa4.62□□□□□ -1.67
VPS8-205ENST00000424721 SLC38A1Q9H2H9 487 aa4.62□□□□□ -1.67
VPS8-205ENST00000424721 LRMDAQ9H2I8 198 aa4.62□□□□□ -1.67
VPS8-205ENST00000424721 C12orf10Q9HB07 376 aa4.62□□□□□ -1.67
VPS8-205ENST00000424721 TMEM27Q9HBJ8 222 aa4.62□□□□□ -1.67
VPS8-205ENST00000424721 FAM30AQ9NZY2 134 aa4.62□□□□□ -1.67
VPS8-205ENST00000424721 CRNNQ9UBG3 495 aaPredicted RBP4.62□□□□□ -1.67
VPS8-205ENST00000424721 GIMAP2Q9UG22 337 aa4.62□□□□□ -1.67
VPS8-205ENST00000424721 ZNF346Q9UL40 294 aaKnown RBP4.62□□□□□ -1.67
VPS8-205ENST00000424721 RCE1Q9Y256 329 aa4.62□□□□□ -1.67
VPS8-205ENST00000424721 POFUT2Q9Y2G5 429 aa4.62□□□□□ -1.67
VPS8-205ENST00000424721 ABCA1O95477 2261 aa4.62□□□□□ -1.67
VPS8-205ENST00000424721 MXRA5Q9NR99 2828 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 A0A096LNT2 108 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 SH3PXD2BA1X283 911 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 CDHR4A6H8M9 788 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 PRORSD1PA6NEY8 169 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 F5H0A9 414 aaPredicted RBP4.61□□□□□ -1.67
VPS8-205ENST00000424721 TRIM77I1YAP6 450 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 AP3D1O14617 1153 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 HDAC3O15379 428 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 SERPINB7O75635 380 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 ZNF432O94892 652 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 OR6A2O95222 327 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 LGI1O95970 557 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 IGKV3-15P01624 115 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 TFP02787 698 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 HIST1H2ABP04908 130 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 ADRA2AP08913 450 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 TACSTD2P09758 323 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 ZCCHC18P0CG32 403 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 NR4A1P22736 598 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 PPIBP23284 216 aaKnown RBP4.61□□□□□ -1.67
VPS8-205ENST00000424721 IGFBP5P24593 272 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 EDNRAP25101 427 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 ARRB2P32121 409 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 THBS4P35443 961 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 DVL1P1P54792 670 aaPredicted RBP4.61□□□□□ -1.67
VPS8-205ENST00000424721 CLDN17P56750 224 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 DSTNP60981 165 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 NCALDP61601 193 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 MRPS11P82912 194 aaKnown RBP4.61□□□□□ -1.67
VPS8-205ENST00000424721 ARF1P84077 181 aaKnown RBP4.61□□□□□ -1.67
VPS8-205ENST00000424721 ROR2Q01974 943 aaKnown RBP4.61□□□□□ -1.67
VPS8-205ENST00000424721 ADIPOQQ15848 244 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 KRTAP24-1Q3LI83 254 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 KRT71Q3SY84 523 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 SPATS1Q496A3 300 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 SPANXN4Q5MJ08 99 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 FAM69AQ5T7M9 428 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 ULK3Q6PHR2 472 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 SHQ1Q6PI26 577 aaKnown RBP4.61□□□□□ -1.67
VPS8-205ENST00000424721 B3GLCTQ6Y288 498 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 MSANTD1Q6ZTZ1 278 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 HIST3H2AQ7L7L0 130 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 CPOQ8IVL8 374 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 UEVLDQ8IX04 471 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 ZNF781Q8N8C0 355 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 ANKFN1Q8N957 763 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 OR1J2Q8NGS2 313 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 OR6S1Q8NH40 331 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 SGMS2Q8NHU3 365 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 CKAP2Q8WWK9 683 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 IPCEF1Q8WWN9 437 aaPredicted RBP4.61□□□□□ -1.67
VPS8-205ENST00000424721 HTRA1Q92743 480 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 RDH5Q92781 318 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 DVL3Q92997 716 aaPredicted RBP4.61□□□□□ -1.67
VPS8-205ENST00000424721 HIST1H2ACQ93077 130 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 SLC38A4Q969I6 547 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 ZNF524Q96C55 264 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 DNAJA3Q96EY1 480 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 SLC47A1Q96FL8 570 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 RSRC1Q96IZ7 334 aaKnown RBP4.61□□□□□ -1.67
VPS8-205ENST00000424721 PPP1R36Q96LQ0 422 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 ZNF385AQ96PM9 386 aaKnown RBP4.61□□□□□ -1.67
VPS8-205ENST00000424721 SORCS2Q96PQ0 1159 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 ZNF607Q96SK3 696 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 DOK1Q99704 481 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 PAIP2Q9BPZ3 127 aaKnown RBP4.61□□□□□ -1.67
VPS8-205ENST00000424721 CENPOQ9BU64 300 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 ZNF416Q9BWM5 594 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 NUF2Q9BZD4 464 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 KCNN2Q9H2S1 579 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 SERHL2Q9H4I8 314 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 MEAF6Q9HAF1 191 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 CRLF2Q9HC73 371 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 GPR35Q9HC97 309 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 SLC52A3Q9NQ40 469 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 THAP1Q9NVV9 213 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 RLIMQ9NVW2 624 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 AASSQ9UDR5 926 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 SLC23A1Q9UHI7 598 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 ZANQ9Y493 2812 aa4.61□□□□□ -1.67
VPS8-205ENST00000424721 ALPK2Q86TB3 2170 aa4.6□□□□□ -1.67
VPS8-205ENST00000424721 TRAV36DV7A0A075B6V5 113 aa4.6□□□□□ -1.67
VPS8-205ENST00000424721 A0A087X0M5 115 aa4.6□□□□□ -1.67
VPS8-205ENST00000424721 IGHV4-61A0A0C4DH41 118 aa4.6□□□□□ -1.67
VPS8-205ENST00000424721 A0A1B0GX30 115 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms