RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 CREB3L2Q70SY1 520 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 IFNEQ86WN2 208 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 OR2L13Q8N349 312 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 MTURNQ8N3F0 131 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 DNAJC22Q8N4W6 341 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 TCEANCQ8N8B7 351 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 ZNF740Q8NDX6 193 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 OR2L5Q8NG80 312 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 OR4K2Q8NGD2 314 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 OR5L1Q8NGL2 311 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 PIGXQ8TBF5 258 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 DYNC2LI1Q8TCX1 351 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 RNASEH2CQ8TDP1 164 aaKnown RBP3.16□□□□□ -1.9
SF3B1-205ENST00000424674 NEK7Q8TDX7 302 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 ADAMTS16Q8TE57 1224 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 TFB1MQ8WVM0 346 aaKnown RBP3.16□□□□□ -1.9
SF3B1-205ENST00000424674 UFD1Q92890 307 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 ABTB1Q969K4 478 aaPredicted RBP3.16□□□□□ -1.9
SF3B1-205ENST00000424674 CREB3L1Q96BA8 519 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 DGCR14Q96DF8 476 aaKnown RBP3.16□□□□□ -1.9
SF3B1-205ENST00000424674 RTP4Q96DX8 246 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 OMA1Q96E52 524 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 YIPF6Q96EC8 236 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 Q96MT0 163 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 TEAD3Q99594 435 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 NIPSNAP1Q9BPW8 284 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 POLDIP3Q9BY77 421 aaKnown RBP3.16□□□□□ -1.9
SF3B1-205ENST00000424674 BCL2L14Q9BZR8 327 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 UBXN6Q9BZV1 441 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 REEP4Q9H6H4 257 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 PARVBQ9HBI1 364 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 C3orf14Q9HBI5 128 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 APOBEC3GQ9HC16 384 aaKnown RBP3.16□□□□□ -1.9
SF3B1-205ENST00000424674 TMBIM4Q9HC24 238 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 TMEM45AQ9NWC5 275 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 SDHAF2Q9NX18 166 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 TEX10Q9NXF1 929 aaPredicted RBP3.16□□□□□ -1.9
SF3B1-205ENST00000424674 CYB5R1Q9UHQ9 305 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 MGAT4AQ9UM21 535 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 KCNIP3Q9Y2W7 256 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 MRPS18BQ9Y676 258 aaKnown RBP3.16□□□□□ -1.9
SF3B1-205ENST00000424674 ARL5AQ9Y689 179 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 MTCH2Q9Y6C9 303 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 AK9Q5TCS8 1911 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 C9orf84Q5VXU9 1444 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 ABCB11O95342 1321 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 CPDO75976 1380 aa3.15□□□□□ -1.9
SF3B1-205ENST00000424674 IGHV4-28A0A0C4DH34 117 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 A0A1B0GU03 582 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 hDV102S1A0JD36 115 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 ANKRD20A5PA0PJZ0 165 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 EFCAB10A6NFE3 127 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 TVP23AA6NH52 213 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 OR5B21A6NL26 309 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 OR2AT4A6NND4 320 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 EFCAB7A8K855 629 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 CDC7O00311 574 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 FADS1O60427 444 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 EEDO75530 441 aaKnown RBP3.15□□□□□ -1.91
SF3B1-205ENST00000424674 CEACAM4O75871 244 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 KRT75O95678 551 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 OXSR1O95747 527 aaPredicted RBP3.15□□□□□ -1.91
SF3B1-205ENST00000424674 DHFRP00374 187 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 SERPINA1P01009 418 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 IFNA2P01563 188 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 ISG15P05161 165 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 C8orf88P0DMB2 117 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 SNHG28P0DPA3 235 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF35P13682 527 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 UCHL3P15374 230 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 CELP19835 753 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 EFNA1P20827 205 aaPredicted RBP3.15□□□□□ -1.91
SF3B1-205ENST00000424674 CRABP2P29373 138 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 RFC3P40938 356 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 XCR1P46094 333 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 CYB561P49447 251 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 SERPINB8P50452 374 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 SSR4P51571 173 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 CAV2P51636 162 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 LBX1P52954 281 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 AP2S1P53680 142 aaPredicted RBP3.15□□□□□ -1.91
SF3B1-205ENST00000424674 XGP55808 180 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 FBXW4P57775 412 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 OR4D2P58180 307 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 B3GALT5-AS1P59052 145 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 HERV-K104P61576 105 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 HMGCS1Q01581 520 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 ELAVL2Q12926 359 aaKnown RBP3.15□□□□□ -1.91
SF3B1-205ENST00000424674 SRSF6Q13247 344 aaKnown RBP3.15□□□□□ -1.91
SF3B1-205ENST00000424674 ITPK1Q13572 414 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 DUSP5Q16690 384 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 TRIM16LQ309B1 348 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 ACSM3Q53FZ2 586 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 SPIN3Q5JUX0 258 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 C10orf25Q5T742 122 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 ATP1A1-AS1Q5TC04 95 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 FRMPD2BQ6IN97 320 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 SLC16A12Q6ZSM3 486 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 Q6ZVQ6 151 aa3.15□□□□□ -1.91
SF3B1-205ENST00000424674 ASCL5Q7RTU5 278 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms