RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 TRBV4-1A0A0J9YWV2 114 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 UNC119BA6NIH7 251 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 OVOL3O00110 214 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 NDUFB2O95178 105 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 IGHMP01871 453 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 SEMG1P04279 462 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 CELA3BP08861 270 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 SNRPBP14678 240 aaKnown RBP9.51□□□□□ -0.89
USP49-204ENST00000423567 FOSL1P15407 271 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 RAB1AP62820 205 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 ERVK-25P63136 954 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 GALK2Q01415 458 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 RUNX1T1Q06455 604 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 TRIM25Q14258 630 aaKnown RBP9.51□□□□□ -0.89
USP49-204ENST00000423567 HIST3H3Q16695 136 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 DNAL1Q4LDG9 190 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 THEM4Q5T1C6 240 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 C10orf128Q5T292 105 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 VHLLQ6RSH7 139 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 SLC16A14Q7RTX9 510 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 IGFN1Q86VF2 1251 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 ZDHHC21Q8IVQ6 265 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 SKA3Q8IX90 412 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 RSRC1Q96IZ7 334 aaKnown RBP9.51□□□□□ -0.89
USP49-204ENST00000423567 TSPAN32Q96QS1 320 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 SEPHS2Q99611 448 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 BDH2Q9BUT1 245 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 TRIM15Q9C019 465 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 IL1RAPQ9NPH3 570 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 CA10Q9NS85 328 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 B3GNT2Q9NY97 397 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 SPEF1Q9Y4P9 236 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 PMF1-BGLAPU3KQ54 211 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 ROS1P08922 2347 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 PRRC2AP48634 2157 aaKnown RBP9.51□□□□□ -0.89
USP49-204ENST00000423567 PRR14LQ5THK1 2151 aa9.51□□□□□ -0.89
USP49-204ENST00000423567 IGHV2OR16-5A0A0B4J2B6 119 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 SH3PXD2BA1X283 911 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 ZNF503-AS2A6NEH8 195 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 CDC42EP2O14613 210 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 OR10H3O60404 316 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 KRT36O76013 467 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 PDE5AO76074 875 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 SLC2A10O95528 541 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 CD8AP01732 235 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 CD14P08571 375 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 T-ENOLP0DO92 83 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 NPR2P20594 1047 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 ATP6V1B2P21281 511 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 RRM2P31350 389 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 SERPINF1P36955 418 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 SNRPD2P62316 118 aaKnown RBP9.5□□□□□ -0.89
USP49-204ENST00000423567 PLP2Q04941 152 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 RAB35Q15286 201 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 FAM98BQ52LJ0 330 aaKnown RBP9.5□□□□□ -0.89
USP49-204ENST00000423567 LCN8Q6JVE9 175 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 KRTAP1-3Q8IUG1 177 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 LRRC75AQ8NAA5 344 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 NUP37Q8NFH4 326 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 NSMAFQ92636 917 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 HDAC2Q92769 488 aaKnown RBP9.5□□□□□ -0.89
USP49-204ENST00000423567 CCDC124Q96CT7 223 aaKnown RBP9.5□□□□□ -0.89
USP49-204ENST00000423567 FBXO17Q96EF6 278 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 C18orf12Q96KH6 178 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 DHRS1Q96LJ7 313 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 ZNF570Q96NI8 536 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 CACNG6Q9BXT2 260 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 C1orf198Q9H425 327 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 MAGIXQ9H6Y5 334 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 SIAEQ9HAT2 523 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 TAS2R1Q9NYW7 299 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 FBXO9Q9UK97 447 aaPredicted RBP9.5□□□□□ -0.89
USP49-204ENST00000423567 F8P00451 2351 aa9.5□□□□□ -0.89
USP49-204ENST00000423567 RAI1Q7Z5J4 1906 aaPredicted RBP9.49□□□□□ -0.89
USP49-204ENST00000423567 IQCMA0A1B0GVH7 501 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 B9A039 149 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 GYG2O15488 501 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 AHCYL1O43865 530 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 UBOX5O94941 541 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 PTHP01270 115 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 CALCRP30988 508 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 OMPP47874 163 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 RPS6KA3P51812 740 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 ZNF133P52736 654 aaPredicted RBP9.49□□□□□ -0.89
USP49-204ENST00000423567 NUDT6P53370 316 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 RPS23P62266 143 aaKnown RBP9.49□□□□□ -0.89
USP49-204ENST00000423567 MRPS34P82930 218 aaKnown RBP9.49□□□□□ -0.89
USP49-204ENST00000423567 FMODQ06828 376 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 SNTB2Q13425 540 aaKnown RBP9.49□□□□□ -0.89
USP49-204ENST00000423567 DAG1Q14118 895 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 RAB39AQ14964 217 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 SEC23BQ15437 767 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 IQCCQ4KMZ1 466 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 GPR139Q6DWJ6 353 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 LRRC18Q8N456 261 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 LINC00471Q8N535 108 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 ARIH2OSQ8N7S6 290 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 OR1J2Q8NGS2 313 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 FANK1Q8TC84 345 aa9.49□□□□□ -0.89
USP49-204ENST00000423567 ASB9Q96DX5 294 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms