RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 A0A1W2PQ09 198 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 BBIP1A8MTZ0 92 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 HNRNPCL2B2RXH8 293 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 HNRNPCL3B7ZW38 293 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 ANGPT2O15123 496 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 ZNF264O43296 627 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 KIAA0513O60268 411 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 UGT2B17O75795 530 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 EPPINO95925 133 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 CSTAP01040 98 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 TFPTP0C1Z6 253 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 HNRNPCL4P0DMR1 293 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 TIMP3P35625 211 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 CRATP43155 626 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 CAMPP49913 170 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 ZNF41P51814 821 aaPredicted RBP2.2□□□□□ -2.06
VPS13A-208ENST00000423463 CRISP3P54108 245 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 CASP9P55211 416 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 B3GALT5-AS1P59052 145 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 DSTNP60981 165 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 EEF1A1P68104 462 aaKnown RBP2.2□□□□□ -2.06
VPS13A-208ENST00000423463 KCNJ10P78508 379 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 HPCAP84074 193 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 STX5Q13190 355 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 ART3Q13508 389 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 CYLC2Q14093 348 aaPredicted RBP2.2□□□□□ -2.06
VPS13A-208ENST00000423463 CD226Q15762 336 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 SYPL1Q16563 259 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 TMEM44Q2T9K0 475 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 GTDC1Q4AE62 458 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 GPAT3Q53EU6 434 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 PAGE3Q5JUK9 113 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.2□□□□□ -2.06
VPS13A-208ENST00000423463 PDSS1Q5T2R2 415 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 C1orf185Q5T7R7 199 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 EEF1A1P5Q5VTE0 462 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 NSUN5P2Q63ZY6 315 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 CGB2Q6NT52 195 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 DLEU7Q6UYE1 221 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 FRRS1Q6ZNA5 592 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 PQLC2Q6ZP29 291 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 C18orf65Q6ZTR6 163 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 EIF3MQ7L2H7 374 aaKnown RBP2.2□□□□□ -2.06
VPS13A-208ENST00000423463 KRT74Q7RTS7 529 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 GALNT10Q86SR1 603 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 IFNEQ86WN2 208 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 ODF3L1Q8IXM7 274 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 PEX5LQ8IYB4 626 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 GTPBP8Q8N3Z3 284 aaPredicted RBP2.2□□□□□ -2.06
VPS13A-208ENST00000423463 ANKFN1Q8N957 763 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 GATSQ8NAP1 163 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 OR5M9Q8NGP3 310 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 OR5W2Q8NH69 310 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 GPR119Q8TDV5 335 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 C10orf82Q8WW14 230 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 ITLN2Q8WWU7 325 aaPredicted RBP2.2□□□□□ -2.06
VPS13A-208ENST00000423463 HARBI1Q96MB7 349 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 SH3GL1Q99961 368 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 PIGQQ9BRB3 760 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 TTYH2Q9BSA4 534 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 KCNN2Q9H2S1 579 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 ARMC7Q9H6L4 198 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 PPP1R3EQ9H7J1 279 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 CALHM2Q9HA72 323 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 CACYBPQ9HB71 228 aaKnown RBP2.2□□□□□ -2.06
VPS13A-208ENST00000423463 BCL2L10Q9HD36 194 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 A4GALTQ9NPC4 353 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 SAR1AQ9NR31 198 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 PNPLA3Q9NST1 481 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 MED17Q9NVC6 651 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 SLC25A37Q9NYZ2 338 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 COQ3Q9NZJ6 369 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 SPRR3Q9UBC9 169 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 P2RX2Q9UBL9 471 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 SH3BGRL2Q9UJC5 107 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 FBXL2Q9UKC9 423 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 ICAM5Q9UMF0 924 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 SLC35A3Q9Y2D2 325 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 AP4B1Q9Y6B7 739 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 FREM2Q5SZK8 3169 aa2.2□□□□□ -2.06
VPS13A-208ENST00000423463 IGLV5-37A0A075B6J1 123 aa2.19□□□□□ -2.06
VPS13A-208ENST00000423463 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.19□□□□□ -2.06
VPS13A-208ENST00000423463 NPIPA5A0A0B4J1W7 369 aa2.19□□□□□ -2.06
VPS13A-208ENST00000423463 OR2M5A3KFT3 312 aa2.19□□□□□ -2.06
VPS13A-208ENST00000423463 C5orf58C9J3I9 102 aa2.19□□□□□ -2.06
VPS13A-208ENST00000423463 PRSS44E7EML9 344 aa2.19□□□□□ -2.06
VPS13A-208ENST00000423463 NPIPA7E9PJI5 369 aa2.19□□□□□ -2.06
VPS13A-208ENST00000423463 ACOT8O14734 319 aa2.19□□□□□ -2.06
VPS13A-208ENST00000423463 ZNHIT1O43257 154 aa2.19□□□□□ -2.06
VPS13A-208ENST00000423463 ZG16O60844 167 aa2.19□□□□□ -2.06
VPS13A-208ENST00000423463 H6PDO95479 791 aa2.19□□□□□ -2.06
VPS13A-208ENST00000423463 CLDN14O95500 239 aa2.19□□□□□ -2.06
VPS13A-208ENST00000423463 DBIP07108 87 aaKnown RBP2.19□□□□□ -2.06
VPS13A-208ENST00000423463 LINGO3P0C6S8 592 aa2.19□□□□□ -2.06
VPS13A-208ENST00000423463 NPIPA8P0DM63 369 aa2.19□□□□□ -2.06
VPS13A-208ENST00000423463 IGHV4-30-4P0DP06 118 aa2.19□□□□□ -2.06
VPS13A-208ENST00000423463 ETS2P15036 469 aa2.19□□□□□ -2.06
VPS13A-208ENST00000423463 ZNF708P17019 499 aa2.19□□□□□ -2.06
VPS13A-208ENST00000423463 ZNF17P17021 662 aa2.19□□□□□ -2.06
VPS13A-208ENST00000423463 PGCP20142 388 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms