RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.83□□□□□ -0.2
COL18A1-205ENST00000423214 RBM15BQ8NDT2 890 aaKnown RBP13.83□□□□□ -0.2
COL18A1-205ENST00000423214 NOXO1Q8NFA2 376 aa13.83□□□□□ -0.2
COL18A1-205ENST00000423214 OR1J2Q8NGS2 313 aa13.83□□□□□ -0.2
COL18A1-205ENST00000423214 SYNPRQ8TBG9 265 aa13.83□□□□□ -0.2
COL18A1-205ENST00000423214 TSPEARQ8WU66 669 aa13.83□□□□□ -0.2
COL18A1-205ENST00000423214 RASSF5Q8WWW0 418 aa13.83□□□□□ -0.2
COL18A1-205ENST00000423214 LRRC37BQ96QE4 947 aa13.83□□□□□ -0.2
COL18A1-205ENST00000423214 SLC19A3Q9BZV2 496 aa13.83□□□□□ -0.2
COL18A1-205ENST00000423214 LRMDAQ9H2I8 198 aa13.83□□□□□ -0.2
COL18A1-205ENST00000423214 HINT3Q9NQE9 182 aaKnown RBP13.83□□□□□ -0.2
COL18A1-205ENST00000423214 TAS2R5Q9NYW4 299 aa13.83□□□□□ -0.2
COL18A1-205ENST00000423214 TREM2Q9NZC2 230 aa13.83□□□□□ -0.2
COL18A1-205ENST00000423214 A0A1W2PRG6 482 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 C17orf100A8MU93 164 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 TPD52L2O43399 206 aaKnown RBP13.82□□□□□ -0.2
COL18A1-205ENST00000423214 SNAP29O95721 258 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 MT-ND5P03915 603 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 CCL2P13500 99 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 DRD4P21917 467 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 PCGF2P35227 344 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 MAGEB1P43366 347 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 CCL8P80075 99 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 MYBPC1Q00872 1141 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 HSF2Q03933 536 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 PCGF3Q3KNV8 242 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 MMEL1Q495T6 779 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 HSP90B2PQ58FF3 399 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 DEF8Q6ZN54 512 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 RBM45Q8IUH3 476 aaKnown RBP13.82□□□□□ -0.2
COL18A1-205ENST00000423214 PAQR4Q8N4S7 273 aaPredicted RBP13.82□□□□□ -0.2
COL18A1-205ENST00000423214 LRRC17Q8N6Y2 441 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 OR10A6Q8NH74 314 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 C11orf40Q8WZ69 217 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 BCL2L14Q9BZR8 327 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 RACGAP1Q9H0H5 632 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 SLCO1C1Q9NYB5 712 aa13.82□□□□□ -0.2
COL18A1-205ENST00000423214 TRAV20A0A0B4J274 112 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 LOC100653049A0A140TA62 436 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 BLOC1S5-TXNDC5H3BN57 136 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 WNT9BO14905 357 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 CDC14BO60729 498 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 RP2O75695 350 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 KRT34O76011 436 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 CLPTM1O96005 669 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 PNPP00491 289 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 THY1P04216 161 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 ASAH2BP0C7U1 165 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 APLNRP35414 380 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 RAD52P43351 418 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 DAP3P51398 398 aaKnown RBP13.81□□□□□ -0.2
COL18A1-205ENST00000423214 ACTG1P63261 375 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 TEKQ02763 1124 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 KLF10Q13118 480 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 NRN1LQ496H8 165 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 LRFN4Q6PJG9 635 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 THSD4Q6ZMP0 1018 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 LRRC18Q8N456 261 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 TEX29Q8N6K0 151 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 OR4D11Q8NGI4 311 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 ZNF519Q8TB69 540 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 ZNF418Q8TF45 676 aaPredicted RBP13.81□□□□□ -0.2
COL18A1-205ENST00000423214 RAB39BQ96DA2 213 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 ZNF347Q96SE7 839 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 KCNN2Q9H2S1 579 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 ZNF665Q9H7R5 613 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 KAT8Q9H7Z6 458 aaKnown RBP13.81□□□□□ -0.2
COL18A1-205ENST00000423214 SAR1AQ9NR31 198 aa13.81□□□□□ -0.2
COL18A1-205ENST00000423214 IGLV3-9A0A075B6K5 115 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 IGHV1-69-2A0A0G2JMI3 117 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 CLDN25C9JDP6 229 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 VENTXO95231 258 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 LYPD3O95274 346 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 F13BP05160 661 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 ANPEPP15144 967 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 ZNF250P15622 560 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 ERVS71-1P61550 626 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 MVKQ03426 396 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 GLO1Q04760 184 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 RABL3Q5HYI8 236 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 NANOGP8Q6NSW7 305 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 FAHD2BQ6P2I3 314 aaPredicted RBP13.8□□□□□ -0.2
COL18A1-205ENST00000423214 SYT14Q8NB59 555 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 SEMA6DQ8NFY4 1073 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 ZFAND2BQ8WV99 257 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 MCHR2Q969V1 340 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 TAMM41Q96BW9 452 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 FAHD2AQ96GK7 314 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 TSPAN32Q96QS1 320 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 ZNF426Q9BUY5 554 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 PCDHAC1Q9H158 963 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 NANOGQ9H9S0 305 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 CCNB1IP1Q9NPC3 277 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 DECR2Q9NUI1 292 aa13.8□□□□□ -0.2
COL18A1-205ENST00000423214 STX18Q9P2W9 335 aaKnown RBP13.8□□□□□ -0.2
COL18A1-205ENST00000423214 ARHGAP32A7KAX9 2087 aa13.79□□□□□ -0.2
COL18A1-205ENST00000423214 RGS9O75916 674 aaPredicted RBP13.79□□□□□ -0.2
COL18A1-205ENST00000423214 CCNOP22674 350 aa13.79□□□□□ -0.2
COL18A1-205ENST00000423214 GZMMP51124 257 aa13.79□□□□□ -0.2
COL18A1-205ENST00000423214 UCP2P55851 309 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms