RNA–Protein interactions for RNA: ENST00000422906.6

UBE2W-202, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 3,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-202ENST00000422906 PKP3Q9Y446 797 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 JRKLQ9Y4A0 524 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 NUP214P35658 2090 aaPredicted RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 SYNGR1O43759 233 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 KERAO60938 352 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 SMIM24O75264 130 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 IGHG2P01859 326 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 POLBP06746 335 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 NPR2P20594 1047 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 BGNP21810 368 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 MPZP25189 248 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ARR3P36575 388 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ARL4AP40617 200 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 RWDD2BP57060 319 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 PCBP3P57721 371 aaKnown RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 BTG1P62324 171 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 HOXA4Q00056 320 aaPredicted RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 GTF2H3Q13889 308 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ZSCAN26Q16670 478 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 DUSP5Q16690 384 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 WHAMMP3Q1A5X7 153 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 HIKESHIQ53FT3 197 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 CCDC92Q53HC0 331 aaPredicted RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ODF2Q5BJF6 829 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 TMEM42Q69YG0 159 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 DHRS7BQ6IAN0 325 aaPredicted RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 LETMD1Q6P1Q0 360 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 DCDC5Q6ZRR9 648 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 MDP1Q86V88 176 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ARMC8Q8IUR7 673 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 IZUMO1Q8IYV9 350 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ARHGAP24Q8N264 748 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 OR5W2Q8NH69 310 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 HAVCR1Q96D42 359 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 RAB3IPQ96QF0 476 aaPredicted RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 CCDC77Q9BR77 488 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 DCTN5Q9BTE1 182 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 WNT5BQ9H1J7 359 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 FKRPQ9H9S5 495 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 SLC2A9Q9NRM0 540 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 KIAA1456Q9P272 454 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 SLC17A6Q9P2U8 582 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 DNAJB9Q9UBS3 223 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ACAD8Q9UKU7 415 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 CFAP73A6NFT4 308 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 A6NLC8 198 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 VSTM5A8MXK1 200 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 HDAC3O15379 428 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 PSMD3O43242 534 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ESRRBO95718 433 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 SERPINA5P05154 406 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ETS1P14921 441 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 FDFT1P37268 417 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 POLR2FP61218 127 aaKnown RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ESRRGP62508 458 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 EGR3Q06889 387 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 PIN1Q13526 163 aaPredicted RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 SPARCL1Q14515 664 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ADRM1Q16186 407 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 LY6G6FQ5SQ64 297 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 CCDC144NLQ6NUI1 221 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 CDC73Q6P1J9 531 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 C1orf94Q6P1W5 598 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 TMIGD1Q6UXZ0 262 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 TIFABQ6ZNK6 161 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ZNF788Q6ZQV5 615 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 CCDC121Q6ZUS5 278 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ZBTB46Q86UZ6 589 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 TAGAPQ8N103 731 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 LINC00612Q8N6U2 182 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 OR4C13Q8NGP0 309 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 IPCEF1Q8WWN9 437 aaPredicted RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 RUNDC3BQ96NL0 473 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 UPK3BQ9BT76 320 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 DSN1Q9H410 356 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 MED11Q9P086 117 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 SEC14L4Q9UDX3 406 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ZNF148Q9UQR1 794 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 BZW2Q9Y6E2 419 aaKnown RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 IGHV1-69-2A0A0G2JMI3 117 aa1.29□□□□□ -2.2
UBE2W-202ENST00000422906 A0A1W2PPI3 338 aa1.29□□□□□ -2.2
UBE2W-202ENST00000422906 TRIM64CA6NLI5 447 aa1.29□□□□□ -2.2
UBE2W-202ENST00000422906 ZNF705EA8MWA4 302 aaPredicted RBP1.29□□□□□ -2.2
UBE2W-202ENST00000422906 UBE2CO00762 179 aa1.29□□□□□ -2.2
UBE2W-202ENST00000422906 LYZL6O75951 148 aa1.29□□□□□ -2.2
UBE2W-202ENST00000422906 SCAF4O95104 1147 aaKnown RBP1.29□□□□□ -2.2
UBE2W-202ENST00000422906 KRT18P05783 430 aaKnown RBP1.29□□□□□ -2.2
UBE2W-202ENST00000422906 SLC35G6P0C7Q6 338 aa1.29□□□□□ -2.2
UBE2W-202ENST00000422906 PBLDP30039 288 aaPredicted RBP1.29□□□□□ -2.2
UBE2W-202ENST00000422906 RPA3P35244 121 aaPredicted RBP1.29□□□□□ -2.2
UBE2W-202ENST00000422906 SELENOPP49908 381 aa1.29□□□□□ -2.2
UBE2W-202ENST00000422906 PRAMEP78395 509 aa1.29□□□□□ -2.2
UBE2W-202ENST00000422906 ILF2Q12905 390 aaKnown RBP1.29□□□□□ -2.2
UBE2W-202ENST00000422906 LAPTM5Q13571 262 aa1.29□□□□□ -2.2
UBE2W-202ENST00000422906 HAGHQ16775 308 aa1.29□□□□□ -2.2
UBE2W-202ENST00000422906 IMPG1Q17R60 797 aa1.29□□□□□ -2.2
UBE2W-202ENST00000422906 ZNF311Q5JNZ3 666 aa1.29□□□□□ -2.2
UBE2W-202ENST00000422906 TMEM200BQ69YZ2 307 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms