RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 DVL1P1P54792 670 aaPredicted RBP9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 UGT2B15P54855 530 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 KLF3P57682 345 aaPredicted RBP9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 PLP2Q04941 152 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 CCNIQ14094 377 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 NKPD1Q17RQ9 610 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 MMEL1Q495T6 779 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 C10orf128Q5T292 105 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 LIPNQ5VXI9 398 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 LRP11Q86VZ4 500 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 RBM15BQ8NDT2 890 aaKnown RBP9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 OR1J2Q8NGS2 313 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 PFN4Q8NHR9 129 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 TMEM255BQ8WV15 326 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 SNX33Q8WV41 574 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 TMEM239Q8WW34 195 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 LIPHQ8WWY8 451 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 ASB10Q8WXI3 467 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 MCHR2Q969V1 340 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 LRRC58Q96CX6 371 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 ZNF347Q96SE7 839 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 C19orf24Q9BVV8 132 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 ZNF416Q9BWM5 594 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 MRPL13Q9BYD1 178 aaKnown RBP9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 BCL2L14Q9BZR8 327 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 LRMDAQ9H2I8 198 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 RNF121Q9H920 327 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 SMURF2Q9HAU4 748 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 INIPQ9NRY2 104 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 DUSP13Q9UII6 198 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 TMEFF2Q9UIK5 374 aaPredicted RBP9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 FZR1Q9UM11 496 aa9.91□□□□□ -0.82
SQSTM1-203ENST00000422245 SVEP1Q4LDE5 3571 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 IGLV3-9A0A075B6K5 115 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 IQCMA0A1B0GVH7 501 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 NCR1O76036 304 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 F13BP05160 661 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 FAM157BP0CG42 384 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 ACADSP16219 412 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 FUT1P19526 365 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 TCN1P20061 433 aaPredicted RBP9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 AQP2P41181 271 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 ZNF133P52736 654 aaPredicted RBP9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 SEC24CP53992 1094 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 TMEM33P57088 247 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 MRPS34P82930 218 aaKnown RBP9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 HSF2Q03933 536 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 RUNX1T1Q06455 604 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 PCGF3Q3KNV8 242 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 GLCCI1Q86VQ1 547 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 NKAIN4Q8IVV8 208 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 PAQR4Q8N4S7 273 aaPredicted RBP9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 RFLNBQ8N5W9 214 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 HINT3Q9NQE9 182 aaKnown RBP9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 ZNF275Q9NSD4 429 aaPredicted RBP9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 C20orf141Q9NUB4 165 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 SLCO1C1Q9NYB5 712 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 RIMS3Q9UJD0 308 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 MED31Q9Y3C7 131 aa9.9□□□□□ -0.82
SQSTM1-203ENST00000422245 HTR3EA5X5Y0 456 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 C17orf100A8MU93 164 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 FAM220BPB1ANY3 271 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 TRMUO75648 421 aaKnown RBP9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 RP2O75695 350 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 MT-ND5P03915 603 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 LCKP06239 509 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 MMP7P09237 267 aaPredicted RBP9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 TSPAN19P0C672 248 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 NAT2P11245 290 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 ZNF250P15622 560 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 H2AFXP16104 143 aaPredicted RBP9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 TNFRSF1BP20333 461 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 IFNA8P32881 189 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 APLNRP35414 380 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 RAD52P43351 418 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 MYBPC1Q00872 1141 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 PIN1Q13526 163 aaPredicted RBP9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 TAF11Q15544 211 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 MOGQ16653 247 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 LRRC23Q53EV4 343 aaPredicted RBP9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 ARMC4Q5T2S8 1044 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 TMEM154Q6P9G4 183 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 RINLQ6ZS11 566 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 SYT14Q8NB59 555 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 PCYOX1LQ8NBM8 494 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 CLDND2Q8NHS1 167 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 ZNF519Q8TB69 540 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 SYNPRQ8TBG9 265 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 C11orf40Q8WZ69 217 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 PRRC1Q96M27 445 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 RACGAP1Q9H0H5 632 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 KCNN2Q9H2S1 579 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 SIAEQ9HAT2 523 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 CCNB1IP1Q9NPC3 277 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 GID8Q9NWU2 228 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 NKIRAS2Q9NYR9 191 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 TAAR3PQ9P1P4 343 aa9.89□□□□□ -0.83
SQSTM1-203ENST00000422245 PPIHO43447 177 aaKnown RBP9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 TCF21O43680 179 aa9.88□□□□□ -0.83
SQSTM1-203ENST00000422245 SHOX2O60902 331 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms