RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 CHAC2Q8WUX2 184 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 TMEM106AQ96A25 262 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 ZNF775Q96BV0 537 aaPredicted RBP7.89□□□□□ -1.15
SNCA-206ENST00000420646 UPRTQ96BW1 309 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 FYTTD1Q96QD9 318 aaKnown RBP7.89□□□□□ -1.15
SNCA-206ENST00000420646 OR5B2Q96R09 309 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 AUNIPQ9H7T9 357 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 ZNF160Q9HCG1 818 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 SLC39A1Q9NY26 324 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 MYEF2Q9P2K5 600 aaKnown RBP7.89□□□□□ -1.15
SNCA-206ENST00000420646 BOLA1Q9Y3E2 137 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 MAP1BP46821 2468 aaKnown RBP7.89□□□□□ -1.15
SNCA-206ENST00000420646 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 IGLV1-36A0A0B4J1U3 117 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 FAM240BA0A1B0GVZ2 78 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 ANKUB1A6NFN9 424 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 NOTOA8MTQ0 251 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 NTN3O00634 580 aaPredicted RBP7.89□□□□□ -1.15
SNCA-206ENST00000420646 LYRM1O43325 122 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 TRIM3O75382 744 aaPredicted RBP7.89□□□□□ -1.15
SNCA-206ENST00000420646 TMIGD3P0DMS9 266 aaPredicted RBP7.89□□□□□ -1.15
SNCA-206ENST00000420646 FGF5P12034 268 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 NAT1P18440 290 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 TALDO1P37837 337 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 DDOSTP39656 456 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 KIR3DL2P43630 455 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 PITPNBP48739 271 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 CAMK2DQ13557 499 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 EFR3AQ14156 821 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 KCNJ8Q15842 424 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 WDR38Q5JTN6 314 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 RSBN1Q5VWQ0 802 aaPredicted RBP7.89□□□□□ -1.15
SNCA-206ENST00000420646 GPR139Q6DWJ6 353 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 FAM198BQ6UWH4 519 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 FAM220AQ7Z4H9 259 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 OTOSQ8NHW6 89 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 KLHL15Q96M94 604 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 LRFN5Q96NI6 719 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 LIN7BQ9HAP6 207 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 MOKQ9UQ07 419 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 IGHV3-15A0A0B4J1V0 119 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 OR4C45A6NMZ5 311 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 SLC43A1O75387 559 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 ARL6IP5O75915 188 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 MT-ATP6P00846 226 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 GSTT2P0CG29 244 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 GSTT2BP0CG30 244 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 CCL3P10147 92 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 CDAP32320 146 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 MAP2K3P46734 347 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 ZNF41P51814 821 aaPredicted RBP7.89□□□□□ -1.15
SNCA-206ENST00000420646 ZFP36L1Q07352 338 aaKnown RBP7.89□□□□□ -1.15
SNCA-206ENST00000420646 B3GNTL1Q67FW5 361 aaPredicted RBP7.89□□□□□ -1.15
SNCA-206ENST00000420646 TRILQ7L0X0 811 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 LRRC28Q86X40 367 aaPredicted RBP7.89□□□□□ -1.15
SNCA-206ENST00000420646 CMTM4Q8IZR5 234 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 OR5L2Q8NGL0 311 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 TMEM234Q8WY98 164 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 SPACA9Q96E40 222 aaPredicted RBP7.89□□□□□ -1.15
SNCA-206ENST00000420646 CCNL2Q96S94 520 aaPredicted RBP7.89□□□□□ -1.15
SNCA-206ENST00000420646 ABHD6Q9BV23 337 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 CDCP1Q9H5V8 836 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 C12orf10Q9HB07 376 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 GPN3Q9UHW5 284 aaPredicted RBP7.89□□□□□ -1.15
SNCA-206ENST00000420646 WIF1Q9Y5W5 379 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 R4GN57 208 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 ZNF292O60281 2723 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 NBEAQ8NFP9 2946 aa7.89□□□□□ -1.15
SNCA-206ENST00000420646 TNRC6BQ9UPQ9 1833 aaKnown RBP7.88□□□□□ -1.15
SNCA-206ENST00000420646 TRAV6A0A075B6T7 132 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 LNP1A1A4G5 178 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 LMX1BO60663 402 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 IGF2P01344 180 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 NPR2P20594 1047 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 BIDP55957 195 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 CD83Q01151 205 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 EIF2B1Q14232 305 aaKnown RBP7.88□□□□□ -1.15
SNCA-206ENST00000420646 PLPPR5Q32ZL2 321 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 TMEM176BQ3YBM2 270 aaPredicted RBP7.88□□□□□ -1.15
SNCA-206ENST00000420646 STAC2Q6ZMT1 411 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 TPRA1Q86W33 373 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 SETD6Q8TBK2 473 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 ABCG5Q9H222 651 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 RANGRFQ9HD47 186 aaPredicted RBP7.88□□□□□ -1.15
SNCA-206ENST00000420646 CENPMQ9NSP4 180 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 KLHL13Q9P2N7 655 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 CHCHD2Q9Y6H1 151 aaPredicted RBP7.88□□□□□ -1.15
SNCA-206ENST00000420646 COL5A1P20908 1838 aaPredicted RBP7.88□□□□□ -1.15
SNCA-206ENST00000420646 IGHV1-45A0A0A0MS14 117 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 NPIPA5E9PKD4 350 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 SLC19A2O60779 497 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 CER1O95813 267 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 SERPINA3P01011 423 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 TACSTD2P09758 323 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 GAAP10253 952 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 COX6A1P12074 109 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 ANOS1P23352 680 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 OTX2P32243 289 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 TMED10P49755 219 aaKnown RBP7.88□□□□□ -1.15
SNCA-206ENST00000420646 HSF1Q00613 529 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms