RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 LRRC17Q8N6Y2 441 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ZNF614Q8N883 585 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 YIPF7Q8N8F6 280 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SIDT2Q8NBJ9 832 aaKnown RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 B3GNT7Q8NFL0 401 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 OR4C15Q8NGM1 316 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 OR8J1Q8NGP2 316 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 OR5H6Q8NGV6 325 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 OR6S1Q8NH40 331 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 GOT1L1Q8NHS2 421 aaPredicted RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 WDR36Q8NI36 951 aaKnown RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 LHFPL5Q8TAF8 219 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 LRRC20Q8TCA0 184 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 GPR151Q8TDV0 419 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ZNRF4Q8WWF5 429 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 GIMAP1Q8WWP7 306 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SELENOMQ8WWX9 145 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ACOT12Q8WYK0 555 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 PSMG2Q969U7 264 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 OMA1Q96E52 524 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 DIRAS2Q96HU8 199 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 KCTD7Q96MP8 289 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 GPR137Q96N19 417 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ZNF578Q96N58 590 aaPredicted RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 RPRD1AQ96P16 312 aaPredicted RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 OPALINQ96PE5 141 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 KLHL5Q96PQ7 755 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 NEDD4LQ96PU5 975 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 PANX1Q96RD7 426 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 MCCC1Q96RQ3 725 aaPredicted RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 CDCA3Q99618 268 aaPredicted RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 PKMYT1Q99640 499 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 OPRPNQ99935 248 aaPredicted RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 KCNS3Q9BQ31 491 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 C7orf50Q9BRJ6 194 aaKnown RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 TTYH2Q9BSA4 534 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 MARVELD1Q9BSK0 173 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 CCM2Q9BSQ5 444 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 INPP5KQ9BT40 448 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ACAT2Q9BWD1 397 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ACPTQ9BZG2 426 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ROGDIQ9GZN7 287 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 PPA2Q9H2U2 334 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 IKZF5Q9H5V7 419 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 TMEM38AQ9H6F2 299 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 TRIM45Q9H8W5 580 aaPredicted RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 PDFQ9HBH1 243 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 EXOSC4Q9NPD3 245 aaKnown RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 ZNF275Q9NSD4 429 aaPredicted RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 ABCB8Q9NUT2 735 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 RBFOX1Q9NWB1 397 aaKnown RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 MS4A12Q9NXJ0 267 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 GPR83Q9NYM4 423 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ZNF226Q9NYT6 803 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 GLTPQ9NZD2 209 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 EIF3KQ9UBQ5 218 aaKnown RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 NUFIP1Q9UHK0 495 aaKnown RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 TEKT2Q9UIF3 430 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 MGAT4BQ9UQ53 548 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 PPP1R3CQ9UQK1 317 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ANGPT4Q9Y264 503 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 LSM2Q9Y333 95 aaKnown RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 SNX10Q9Y5X0 201 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 FKBP7Q9Y680 259 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ALPK3Q96L96 1907 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 KIF26AQ9ULI4 1882 aaPredicted RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 HTTP42858 3142 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 DSPPQ9NZW4 1301 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 FRMPD3Q5JV73 1810 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 TRAV34A0A0B4J273 112 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 TRBV5-4A0A0C4DH59 114 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 A0A0G2JMP0 313 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 CXorf51AA0A1B0GTR3 108 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 A0A1B0GW55 424 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 A0A1W2PQL4 384 aaPredicted RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 TMEM129A0AVI4 362 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 C15orf61A6NNL5 157 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 LEUTXA8MZ59 168 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 C17orf105B2RV13 164 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 LOC730098B7Z3J9 87 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 KRBOX1C9JBD0 128 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 F8VVB4 439 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 F8VWA3 439 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 INMT-MINDY4F8WBC2 141 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 TLR4O00206 839 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 BTN3A3O00478 584 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 FAAHO00519 579 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 CCL22O00626 93 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 SCAMP2O15127 329 aaKnown RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 CASC3O15234 703 aaKnown RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 TAPBPO15533 448 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 CSO75390 466 aaKnown RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 GPX5O75715 221 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 ZFAND5O76080 213 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 SLC22A5O76082 557 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 OR7A10O76100 309 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 CDRT1O95170 752 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 GADD45GO95257 159 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 TGM6O95932 706 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 PDYNP01213 254 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms