RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 CDKN2AP42771 156 aaKnown RBP7.47□□□□□ -1.21
TRIM48-201ENST00000417545 UBE2NP61088 152 aaKnown RBP7.47□□□□□ -1.21
TRIM48-201ENST00000417545 KEAP1Q14145 624 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 P2RY6Q15077 328 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 SGCAQ16586 387 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 C12orf73Q69YU5 71 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 OR7E24Q6IFN5 339 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 ALKBH2Q6NS38 261 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 PLBD1Q6P4A8 553 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 ZNF813Q6ZN06 617 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 CXorf67Q86X51 503 aaPredicted RBP7.47□□□□□ -1.21
TRIM48-201ENST00000417545 GID4Q8IVV7 300 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 C8orf59Q8N0T1 100 aaPredicted RBP7.47□□□□□ -1.21
TRIM48-201ENST00000417545 FAM26EQ8N5C1 309 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 OR8J1Q8NGP2 316 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 LILRB4Q8NHJ6 448 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 TMEM163Q8TC26 289 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 SSC4DQ8WTU2 575 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 MCHR2Q969V1 340 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 HRASLS5Q96KN8 279 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 IL4I1Q96RQ9 567 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 RASSF1Q9NS23 344 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 CLN6Q9NWW5 311 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 ELOVL5Q9NYP7 299 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 VSX1Q9NZR4 365 aaPredicted RBP7.47□□□□□ -1.21
TRIM48-201ENST00000417545 MALT1Q9UDY8 824 aa7.47□□□□□ -1.21
TRIM48-201ENST00000417545 FOXD3Q9UJU5 478 aaPredicted RBP7.47□□□□□ -1.21
TRIM48-201ENST00000417545 INTS1Q8N201 2190 aaKnown RBP7.47□□□□□ -1.21
TRIM48-201ENST00000417545 ZNF99A8MXY4 864 aaPredicted RBP7.46□□□□□ -1.21
TRIM48-201ENST00000417545 H0YAE9 185 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 SEC14L2O76054 403 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 GYPBP06028 91 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 NPR2P20594 1047 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 EPHA2P29317 976 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 FMO3P31513 532 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 ATP6V1E1P36543 226 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 BLVRAP53004 296 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 ARF1P84077 181 aaKnown RBP7.46□□□□□ -1.21
TRIM48-201ENST00000417545 GLO1Q04760 184 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 RUNX1T1Q06455 604 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 IL18R1Q13478 541 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 C6orf52Q5T4I8 152 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 KRT80Q6KB66 452 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 BHLHA15Q7RTS1 189 aaPredicted RBP7.46□□□□□ -1.21
TRIM48-201ENST00000417545 LIX1LQ8IVB5 337 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 CPOQ8IVL8 374 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 GLB1L2Q8IW92 636 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 STEAP2Q8NFT2 490 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 ITLN2Q8WWU7 325 aaPredicted RBP7.46□□□□□ -1.21
TRIM48-201ENST00000417545 RNASE6Q93091 150 aaKnown RBP7.46□□□□□ -1.21
TRIM48-201ENST00000417545 RFKQ969G6 155 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 MUCL1Q96DR8 90 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 Q96MT0 163 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 FOXN4Q96NZ1 517 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 ZNF184Q99676 751 aaPredicted RBP7.46□□□□□ -1.21
TRIM48-201ENST00000417545 FOXB1Q99853 325 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 CDADC1Q9BWV3 514 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 HDHD5Q9BXW7 423 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 NUAK2Q9H093 628 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 RNF121Q9H920 327 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 MED20Q9H944 212 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 CCNB1IP1Q9NPC3 277 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 FKBP7Q9Y680 259 aa7.46□□□□□ -1.21
TRIM48-201ENST00000417545 SPENQ96T58 3664 aaKnown RBP7.46□□□□□ -1.22
TRIM48-201ENST00000417545 A0A096LPE4 126 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 A0A1W2PPZ6 126 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 OR6C68A6NDL8 312 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 FAM171A2A8MVW0 826 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 A8MXE2 369 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 C16orf97H3BN30 126 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 SLC16A6O15403 523 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 PRODHO43272 600 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 PRKYO43930 277 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 TMCC2O75069 709 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 WNT11O96014 354 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 CGAP01215 116 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 CD79AP11912 226 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 B4GALT1P15291 398 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 CTLA4P16410 223 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 SPI1P17947 270 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 MSR1P21757 451 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 IGHV1-2P23083 117 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 EDNRAP25101 427 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 LAP3P28838 519 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 PYCR1P32322 319 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 NTF4P34130 210 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 SLC25A1P53007 311 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 CDH11P55287 796 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 APOFQ13790 326 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 TSC22D1Q15714 1073 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 PHYHD1Q5SRE7 291 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 C10orf128Q5T292 105 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 SFRP5Q5T4F7 317 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 MEDAGQ5VYS4 303 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 TMEM53Q6P2H8 277 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 ANKRD16Q6P6B7 361 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 SLC25A47Q6Q0C1 308 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 SLC16A14Q7RTX9 510 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 NPEPL1Q8NDH3 523 aa7.45□□□□□ -1.22
TRIM48-201ENST00000417545 C1orf162Q8NEQ5 155 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms