RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 TMEM43Q9BTV4 400 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 EGLN1Q9GZT9 426 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 KCNN2Q9H2S1 579 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 CENPHQ9H3R5 247 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 TCF7L2Q9NQB0 619 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 OPN4Q9UHM6 478 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 NUP50Q9UKX7 468 aa8.52□□□□□ -1.05
MDC1-202ENST00000416571 PPIAL4EA0A075B759 164 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 PPIAL4CA0A0B4J2A2 164 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 POM121CA8CG34 1229 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 PPIAL4DF5H284 164 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 UBDO15205 165 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 TPST1O60507 370 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 FSHBP01225 129 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 IGHV3-13P01766 116 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 QDPRP09417 244 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 PPIAL4FP0DN26 164 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 BMP2P12643 396 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 CDH12P55289 794 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 CLRN1P58418 232 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 IL13RA1P78552 427 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 CDK6Q00534 326 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 MELKQ14680 651 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 ZNF718Q3SXZ3 478 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 GCNT6Q5T4J0 391 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 SWT1Q5T5J6 900 aaKnown RBP8.51□□□□□ -1.05
MDC1-202ENST00000416571 HHATQ5VTY9 493 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 NHLRC1Q6VVB1 395 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 WDR88Q6ZMY6 472 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 LRRC18Q8N456 261 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 OR9I1Q8NGQ6 314 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 GTF3AQ92664 365 aaKnown RBP8.51□□□□□ -1.05
MDC1-202ENST00000416571 DVL3Q92997 716 aaPredicted RBP8.51□□□□□ -1.05
MDC1-202ENST00000416571 SLC25A28Q96A46 364 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 TRIM44Q96DX7 344 aaPredicted RBP8.51□□□□□ -1.05
MDC1-202ENST00000416571 TMEM109Q9BVC6 243 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 C1QTNF5Q9BXJ0 243 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 PAIP1Q9H074 479 aaKnown RBP8.51□□□□□ -1.05
MDC1-202ENST00000416571 EVA1AQ9H8M9 152 aa8.51□□□□□ -1.05
MDC1-202ENST00000416571 EIF3KQ9UBQ5 218 aaKnown RBP8.51□□□□□ -1.05
MDC1-202ENST00000416571 ARHGAP32A7KAX9 2087 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 TANC2Q9HCD6 1990 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 MCIDASD6RGH6 385 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 ZNF500O60304 480 aaPredicted RBP8.5□□□□□ -1.05
MDC1-202ENST00000416571 SERPINB7O75635 380 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 MFN2O95140 757 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 IGHV1-46P01743 117 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 IGHG1P01857 330 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 HIST1H2ABP04908 130 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 VIMP08670 466 aaKnown RBP8.5□□□□□ -1.05
MDC1-202ENST00000416571 UMPSP11172 480 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 PPIBP23284 216 aaKnown RBP8.5□□□□□ -1.05
MDC1-202ENST00000416571 SLC6A2P23975 617 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 ZFP36P26651 326 aaKnown RBP8.5□□□□□ -1.05
MDC1-202ENST00000416571 VSNL1P62760 191 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 NRN1LQ496H8 165 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 ZMAT1Q5H9K5 638 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 SPATA46Q5T0L3 261 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 LRFN4Q6PJG9 635 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 SLC2A7Q6PXP3 512 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 HIST3H2AQ7L7L0 130 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 COMTD1Q86VU5 262 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 ARMC8Q8IUR7 673 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 HIPK4Q8NE63 616 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 GTF2H4Q92759 462 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 HIST1H2ACQ93077 130 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 LRRC58Q96CX6 371 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 MRI1Q9BV20 369 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 SLC19A3Q9BZV2 496 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 MS4A7Q9GZW8 240 aaPredicted RBP8.5□□□□□ -1.05
MDC1-202ENST00000416571 CCNB1IP1Q9NPC3 277 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 NANSQ9NR45 359 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 SDR39U1Q9NRG7 319 aaPredicted RBP8.5□□□□□ -1.05
MDC1-202ENST00000416571 CYSLTR2Q9NS75 346 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 THAP1Q9NVV9 213 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 PLEK2Q9NYT0 353 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 ZNF69Q9UC07 566 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 CGGBP1Q9UFW8 167 aaPredicted RBP8.5□□□□□ -1.05
MDC1-202ENST00000416571 LEF1Q9UJU2 399 aaPredicted RBP8.5□□□□□ -1.05
MDC1-202ENST00000416571 PURGQ9UJV8 347 aaKnown RBP8.5□□□□□ -1.05
MDC1-202ENST00000416571 AUP1Q9Y679 476 aa8.5□□□□□ -1.05
MDC1-202ENST00000416571 CHP2O43745 196 aa8.49□□□□□ -1.05
MDC1-202ENST00000416571 MGRN1O60291 552 aa8.49□□□□□ -1.05
MDC1-202ENST00000416571 UBOX5O94941 541 aa8.49□□□□□ -1.05
MDC1-202ENST00000416571 CH25HO95992 272 aa8.49□□□□□ -1.05
MDC1-202ENST00000416571 IGHMP01871 453 aa8.49□□□□□ -1.05
MDC1-202ENST00000416571 RNASE1P07998 156 aaKnown RBP8.49□□□□□ -1.05
MDC1-202ENST00000416571 SBK2P0C263 348 aa8.49□□□□□ -1.05
MDC1-202ENST00000416571 PGA4P0DJD7 388 aa8.49□□□□□ -1.05
MDC1-202ENST00000416571 PGA3P0DJD8 388 aa8.49□□□□□ -1.05
MDC1-202ENST00000416571 STOMP27105 288 aa8.49□□□□□ -1.05
MDC1-202ENST00000416571 AQP1P29972 269 aa8.49□□□□□ -1.05
MDC1-202ENST00000416571 RBMXP38159 391 aaKnown RBP8.49□□□□□ -1.05
MDC1-202ENST00000416571 LIPAP38571 399 aa8.49□□□□□ -1.05
MDC1-202ENST00000416571 STX1BP61266 288 aa8.49□□□□□ -1.05
MDC1-202ENST00000416571 ZNF154Q13106 437 aa8.49□□□□□ -1.05
MDC1-202ENST00000416571 SCARB2Q14108 478 aa8.49□□□□□ -1.05
MDC1-202ENST00000416571 ZNF74Q16587 644 aa8.49□□□□□ -1.05
MDC1-202ENST00000416571 THEM4Q5T1C6 240 aa8.49□□□□□ -1.05
MDC1-202ENST00000416571 ZNF613Q6PF04 617 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms