RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 IAH1Q2TAA2 248 aaPredicted RBP11.85□□□□□ -0.51
SCN1B-202ENST00000415950 PDZD11Q5EBL8 140 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 WBP2NLQ6ICG8 309 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 FRMD1Q8N878 549 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 HAVCR2Q8TDQ0 301 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 NXPE3Q969Y0 559 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 RAB3CQ96E17 227 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 PATZ1Q9HBE1 687 aaKnown RBP11.85□□□□□ -0.51
SCN1B-202ENST00000415950 A4GNTQ9UNA3 340 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 P2RY10O00398 339 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 CD160O95971 181 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 RPL23AP62750 156 aaKnown RBP11.85□□□□□ -0.51
SCN1B-202ENST00000415950 ARSJQ5FYB0 599 aaPredicted RBP11.85□□□□□ -0.51
SCN1B-202ENST00000415950 FAM209AQ5JX71 171 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 MFSD12Q6NUT3 480 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 CPEB2Q7Z5Q1 589 aaKnown RBP11.85□□□□□ -0.51
SCN1B-202ENST00000415950 PATE1Q8WXA2 126 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 SGK3Q96BR1 496 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 RBMXL1Q96E39 390 aaKnown RBP11.85□□□□□ -0.51
SCN1B-202ENST00000415950 MBNL1Q9NR56 388 aaKnown RBP11.85□□□□□ -0.51
SCN1B-202ENST00000415950 CPNE7Q9UBL6 633 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 HRH3Q9Y5N1 445 aa11.85□□□□□ -0.51
SCN1B-202ENST00000415950 PHIPQ8WWQ0 1821 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 G3V3Y1 287 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 SCGB1D1O95968 90 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 HIST1H1CP16403 213 aaKnown RBP11.84□□□□□ -0.51
SCN1B-202ENST00000415950 SERPINF1P36955 418 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 MTCP1P56278 107 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 NDUFA6P56556 154 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 CLVS2Q5SYC1 327 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 ASTLQ6HA08 431 aaPredicted RBP11.84□□□□□ -0.51
SCN1B-202ENST00000415950 SLC51BQ86UW2 128 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 BATF2Q8N1L9 274 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 ANKRD53Q8N9V6 530 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 SLC30A7Q8NEW0 376 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 OR6M1Q8NGM8 313 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 SHDQ96IW2 340 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 VN1R3Q9BXE9 311 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 PITHD1Q9GZP4 211 aaPredicted RBP11.84□□□□□ -0.51
SCN1B-202ENST00000415950 SLC52A3Q9NQ40 469 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 PLEKHB1Q9UF11 243 aaPredicted RBP11.84□□□□□ -0.51
SCN1B-202ENST00000415950 ENTPD2Q9Y5L3 495 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 TEX51A0A1B0GUA7 166 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 ACHEP22303 614 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 ZFP36L2P47974 494 aaKnown RBP11.84□□□□□ -0.51
SCN1B-202ENST00000415950 RNF4P78317 190 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 TESK1Q15569 626 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 TMEM176BQ3YBM2 270 aaPredicted RBP11.84□□□□□ -0.51
SCN1B-202ENST00000415950 HACD4Q5VWC8 232 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 TANGO2Q6ICL3 276 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 SLC48A1Q6P1K1 146 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 OR4Q3Q8NH05 313 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 RNF128Q8TEB7 428 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 CHAC2Q8WUX2 184 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 MIXL1Q9H2W2 232 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 CDH20Q9HBT6 801 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 ACAD8Q9UKU7 415 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 CEBPZOSA8MTT3 80 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 FFAR1O14842 300 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 ZNF264O43296 627 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 DNAJB6O75190 326 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 CBX7O95931 251 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 CA3P07451 260 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 PI3P19957 117 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 POU3F3P20264 500 aaPredicted RBP11.84□□□□□ -0.51
SCN1B-202ENST00000415950 BTG1P62324 171 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 SHEQ5VZ18 495 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 TMUB2Q71RG4 321 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 FAM122BQ7Z309 247 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 TMEM200AQ86VY9 491 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 MKXQ8IYA7 352 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 OR5M1Q8NGP8 315 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 SORCS2Q96PQ0 1159 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 SPACA5Q96QH8 159 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 ERVMER34-1Q9H9K5 563 aa11.84□□□□□ -0.51
SCN1B-202ENST00000415950 TRBV5-3A0A0A0MS03 114 aa11.83□□□□□ -0.51
SCN1B-202ENST00000415950 C2orf72A6NCS6 295 aa11.83□□□□□ -0.51
SCN1B-202ENST00000415950 PMP2P02689 132 aa11.83□□□□□ -0.51
SCN1B-202ENST00000415950 FCGR2AP12318 317 aa11.83□□□□□ -0.51
SCN1B-202ENST00000415950 EFNA3P52797 238 aa11.83□□□□□ -0.51
SCN1B-202ENST00000415950 PLCXD3Q63HM9 321 aa11.83□□□□□ -0.51
SCN1B-202ENST00000415950 KIAA1958Q8N8K9 716 aa11.83□□□□□ -0.51
SCN1B-202ENST00000415950 TCEAL7Q9BRU2 100 aa11.83□□□□□ -0.51
SCN1B-202ENST00000415950 FANCFQ9NPI8 374 aa11.83□□□□□ -0.51
SCN1B-202ENST00000415950 OR14J1Q9UGF5 321 aa11.83□□□□□ -0.51
SCN1B-202ENST00000415950 FBXO7Q9Y3I1 522 aa11.83□□□□□ -0.51
SCN1B-202ENST00000415950 IDSB3KWA1 339 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 RAB4AP20338 218 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 IRS1P35568 1242 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 RAB31Q13636 194 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 IRF3Q14653 427 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 AANATQ16613 207 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 SFRP5Q5T4F7 317 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 PRAMEF20Q5VT98 475 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 MOB3CQ70IA8 216 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 FGF13Q92913 245 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 FAM3DQ96BQ1 224 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 SCN2AQ99250 2005 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 ULBP2Q9BZM5 246 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 WWTR1Q9GZV5 400 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms