RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 SLC6A19Q695T7 634 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 TMEM81Q6P7N7 255 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 SLC35D2Q76EJ3 337 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 CLEC1AQ8NC01 280 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 OR51S1Q8NGJ8 323 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 OR1S1Q8NH92 325 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 RBM18Q96H35 190 aaKnown RBP8.9□□□□□ -0.98
SS18-203ENST00000415083 Q9N2J8 555 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 PRTFDC1Q9NRG1 225 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 SDHAF2Q9NX18 166 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 MUC3AQ02505 3323 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 SLC22A23A1A5C7 686 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 FAM221BA6H8Z2 402 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 SNRPGP15A8MWD9 76 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 CHURC1-FNTBB4DL54 471 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 ATP6V1G2-DDX39BF2Z307 99 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 ITGA10O75578 1167 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 APEHP13798 732 aaKnown RBP8.9□□□□□ -0.99
SS18-203ENST00000415083 TACR3P29371 465 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 CALCRP30988 508 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 FNTBP49356 437 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 STX4Q12846 297 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 ZNHIT3Q15649 155 aaPredicted RBP8.9□□□□□ -0.99
SS18-203ENST00000415083 C2orf76Q3KRA6 126 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 ZNF660Q6AZW8 331 aaPredicted RBP8.9□□□□□ -0.99
SS18-203ENST00000415083 WBP2NLQ6ICG8 309 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 C3P1Q6ZMU1 363 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 SLC51BQ86UW2 128 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 EID2Q8N6I1 236 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 OR6N2Q8NGY6 317 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 COQ8AQ8NI60 647 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 TSLPQ969D9 159 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 SHARPINQ9H0F6 387 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 KIF25Q9UIL4 384 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 SLC6A5Q9Y345 797 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 MRPS18BQ9Y676 258 aaKnown RBP8.9□□□□□ -0.99
SS18-203ENST00000415083 BRWD1Q9NSI6 2320 aa8.9□□□□□ -0.99
SS18-203ENST00000415083 SPTY2D1-AS1A0A0U1RR47 76 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 CDC14CA4D256 554 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 ANXA2P2A6NMY6 339 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 A8MXK9 166 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 ICOSLGO75144 302 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 ALOX12BO75342 701 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 UTS2O95399 124 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 PLGP00747 810 aaPredicted RBP8.89□□□□□ -0.99
SS18-203ENST00000415083 RNH1P13489 461 aaKnown RBP8.89□□□□□ -0.99
SS18-203ENST00000415083 POU3F4P49335 361 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 GFERP55789 205 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 SEC61A1P61619 476 aaKnown RBP8.89□□□□□ -0.99
SS18-203ENST00000415083 TAGLNQ01995 201 aaKnown RBP8.89□□□□□ -0.99
SS18-203ENST00000415083 ATRAIDQ6UW56 229 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 TMUB2Q71RG4 321 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 RNF144BQ7Z419 303 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 GALNT16Q8N428 558 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 OR51A2Q8NGJ7 313 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 DGAT2Q96PD7 388 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 CCDC3Q9BQI4 270 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 G6PC3Q9BUM1 346 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 LRRC61Q9BV99 259 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 C1orf198Q9H425 327 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 TCF7L1Q9HCS4 588 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 MAB21L2Q9Y586 359 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 HRH3Q9Y5N1 445 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 ETV7Q9Y603 341 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 IGHV5-51A0A0C4DH38 117 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 TCRBV21S2A2A0A5A6 115 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 PCP4L1A6NKN8 68 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 ELOA3DA6NLF2 546 aaPredicted RBP8.89□□□□□ -0.99
SS18-203ENST00000415083 DDAH2O95865 285 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 GABRA1P14867 456 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 IGFBP3P17936 291 aaPredicted RBP8.89□□□□□ -0.99
SS18-203ENST00000415083 YPEL5P62699 121 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 ELOA3BQ3SY89 546 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 TEX30Q5JUR7 227 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 PLPP7Q8NBV4 271 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 ELOA3Q8NG57 546 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 OTOSQ8NHW6 89 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 ZNF519Q8TB69 540 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 IGLV1-36A0A0B4J1U3 117 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 ARPC5O15511 151 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 EIF4E2O60573 245 aaKnown RBP8.89□□□□□ -0.99
SS18-203ENST00000415083 B3GALNT1O75752 331 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 IL33O95760 270 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 TNFP01375 233 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 IGKV3-11P04433 115 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 HLA-DOBP13765 273 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 MPGP29372 298 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.89□□□□□ -0.99
SS18-203ENST00000415083 CORO6Q6QEF8 472 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 JAZF1Q86VZ6 243 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 OR2AK2Q8NG84 335 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 PHOSPHO1Q8TCT1 267 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 TOE1Q96GM8 510 aaKnown RBP8.89□□□□□ -0.99
SS18-203ENST00000415083 GINS4Q9BRT9 223 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 DUSP15Q9H1R2 295 aaPredicted RBP8.89□□□□□ -0.99
SS18-203ENST00000415083 GPR160Q9UJ42 338 aa8.89□□□□□ -0.99
SS18-203ENST00000415083 IGKV1D-43A0A0B4J1Z2 117 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 LDLRAD4O15165 306 aa8.88□□□□□ -0.99
SS18-203ENST00000415083 CREBL2O60519 120 aaPredicted RBP8.88□□□□□ -0.99
SS18-203ENST00000415083 NSA2O95478 260 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms