RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 OR52L1Q8NGH7 329 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 C9orf43Q8TAL5 461 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-202ENST00000414700 HIST1H2ACQ93077 130 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 IL4I1Q96RQ9 567 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 ARHGAP9Q9BRR9 750 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 TAPBPLQ9BX59 468 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 BEX2Q9BXY8 128 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 SRXN1Q9BYN0 137 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 SLC25A19Q9HC21 320 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 SPRR3Q9UBC9 169 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 IGHV3-15A0A0B4J1V0 119 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 SLC35F4A4IF30 521 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 LEUTXA8MZ59 168 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 MS4A18H0YCH9 400 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 PLPP3O14495 311 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 PRKYO43930 277 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 PLGP00747 810 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-202ENST00000414700 C1QBP02746 253 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 CTRB1P17538 263 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 RPL4P36578 427 aaKnown RBP13.88□□□□□ -0.19
SHMT2-202ENST00000414700 P2RY4P51582 365 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 CLDN18P56856 261 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 PRPS1P60891 318 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 SRYQ05066 204 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 ZNF79Q15937 498 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 C3AR1Q16581 482 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 MS4A18Q3C1V0 323 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 CTRB2Q6GPI1 263 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 RPL13AP3Q6NVV1 102 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 PLXDC2Q6UX71 529 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 OR6S1Q8NH40 331 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 NEIL3Q8TAT5 605 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 ADGRG7Q96K78 797 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 KATNB1Q9BVA0 655 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 ASPNQ9BXN1 380 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 PRORYQ9H606 182 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 LDAHQ9H6V9 325 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 ALKBH4Q9NXW9 302 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 B3GNT2Q9NY97 397 aa13.88□□□□□ -0.19
SHMT2-202ENST00000414700 MRPL39Q9NYK5 338 aaKnown RBP13.88□□□□□ -0.19
SHMT2-202ENST00000414700 TMEM8BA6NDV4 472 aa13.87□□□□□ -0.19
SHMT2-202ENST00000414700 TMCC2O75069 709 aa13.87□□□□□ -0.19
SHMT2-202ENST00000414700 STSP08842 583 aa13.87□□□□□ -0.19
SHMT2-202ENST00000414700 GABRB1P18505 474 aa13.87□□□□□ -0.19
SHMT2-202ENST00000414700 FKBP2P26885 142 aaKnown RBP13.87□□□□□ -0.19
SHMT2-202ENST00000414700 CDC42P60953 191 aa13.87□□□□□ -0.19
SHMT2-202ENST00000414700 ERVK-25P63136 954 aa13.87□□□□□ -0.19
SHMT2-202ENST00000414700 LNX2Q8N448 690 aa13.87□□□□□ -0.19
SHMT2-202ENST00000414700 TCEANCQ8N8B7 351 aa13.87□□□□□ -0.19
SHMT2-202ENST00000414700 YIPF7Q8N8F6 280 aa13.87□□□□□ -0.19
SHMT2-202ENST00000414700 Q8NA96 180 aa13.87□□□□□ -0.19
SHMT2-202ENST00000414700 OR4M1Q8NGD0 313 aa13.87□□□□□ -0.19
SHMT2-202ENST00000414700 UBASH3BQ8TF42 649 aa13.87□□□□□ -0.19
SHMT2-202ENST00000414700 ZNF845Q96IR2 970 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-202ENST00000414700 UCN2Q96RP3 112 aa13.87□□□□□ -0.19
SHMT2-202ENST00000414700 RNF121Q9H920 327 aa13.87□□□□□ -0.19
SHMT2-202ENST00000414700 NRIP3Q9NQ35 241 aa13.87□□□□□ -0.19
SHMT2-202ENST00000414700 IMPAD1Q9NX62 359 aa13.87□□□□□ -0.19
SHMT2-202ENST00000414700 IER3IP1Q9Y5U9 82 aa13.87□□□□□ -0.19
SHMT2-202ENST00000414700 TRGV5A0A0B4J1U4 118 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 A0A0B4J293 547 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 EFCAB10A6NFE3 127 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 SNTNA6NMZ2 147 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 RGS5O15539 181 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 FZD7O75084 574 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 PMS2P2O95744 297 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 SLC6A6P31641 620 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 CTXN1P60606 82 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 EFNB1P98172 346 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 HSF1Q00613 529 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 FOXK2Q01167 660 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 TAB1Q15750 504 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 SNAPC1Q16533 368 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 ZMAT1Q5H9K5 638 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 TOR2AQ5JU69 321 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 CASP12Q6UXS9 341 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 H1FNTQ75WM6 255 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-202ENST00000414700 SIAH3Q8IW03 269 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 OR10D3Q8NH80 312 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 ERMAPQ96PL5 475 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-202ENST00000414700 EXO5Q9H790 373 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 CHST11Q9NPF2 352 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 NPIPA5E9PKD4 350 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 IMPA2O14732 288 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 SURF4O15260 269 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 RNF13O43567 381 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 HSMCR30P0CW71 290 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 ZNF708P17019 499 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 ENPP1P22413 925 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 AZGP1P25311 298 aaKnown RBP13.86□□□□□ -0.19
SHMT2-202ENST00000414700 PTGS2P35354 604 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 EIF1AXP47813 144 aaKnown RBP13.86□□□□□ -0.19
SHMT2-202ENST00000414700 H3F3AP84243 136 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 PUDPQ08623 228 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 TSTQ16762 297 aaKnown RBP13.86□□□□□ -0.19
SHMT2-202ENST00000414700 FAM205BPQ63HN1 556 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 HBMQ6B0K9 141 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 VASNQ6EMK4 673 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 ESPNLQ6ZVH7 1005 aa13.86□□□□□ -0.19
SHMT2-202ENST00000414700 PTCHD4Q6ZW05 846 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms