RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 NEIL3Q8TAT5 605 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 CHAC2Q8WUX2 184 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 DIRAS2Q96HU8 199 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 UBL7Q96S82 380 aaPredicted RBP8.92□□□□□ -0.98
DDB1-202ENST00000414411 INPP5EQ9NRR6 644 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 INIPQ9NRY2 104 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 RABL2AQ9UBK7 228 aaPredicted RBP8.92□□□□□ -0.98
DDB1-202ENST00000414411 DKKL1Q9UK85 242 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 BAIAP2Q9UQB8 552 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 NBASA2RRP1 2371 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 A0A087WUJ7 227 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 A0A1W2PQ09 198 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 SHISA3A0PJX4 238 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 FABP12A6NFH5 140 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 ACOT7O00154 380 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 PPP1R3DO95685 299 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 ZNF17P17021 662 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 ZNF3P17036 446 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 IL11P20809 199 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 SLC2A5P22732 501 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 NOS3P29474 1203 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 APOBEC1P41238 236 aaKnown RBP8.92□□□□□ -0.98
DDB1-202ENST00000414411 POLR2HP52434 150 aaKnown RBP8.92□□□□□ -0.98
DDB1-202ENST00000414411 MAP2K6P52564 334 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 CAV3P56539 151 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 PPP3R1P63098 170 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 FHL1Q13642 323 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 CRMP1Q14194 572 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 GALEQ14376 348 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 INSL4Q14641 139 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 CARTPTQ16568 116 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 KLHL12Q53G59 568 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 WIPI1Q5MNZ9 446 aaPredicted RBP8.92□□□□□ -0.98
DDB1-202ENST00000414411 MZT2BQ6NZ67 158 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 TMEM91Q6ZNR0 172 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 SPATC1Q76KD6 591 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 SLC43A2Q8N370 569 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 GDPD1Q8N9F7 314 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 IL17RDQ8NFM7 739 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 OR5M1Q8NGP8 315 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 OR14L1PQ8NHC6 308 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 TBX5Q99593 518 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 TEAD3Q99594 435 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 DEFB127Q9H1M4 99 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 MCCC2Q9HCC0 563 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 TIGARQ9NQ88 270 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 BABAM2Q9NXR7 383 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 RPS6KB2Q9UBS0 482 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 PAIP2BQ9ULR5 123 aaKnown RBP8.92□□□□□ -0.98
DDB1-202ENST00000414411 RPH3AQ9Y2J0 694 aaPredicted RBP8.92□□□□□ -0.98
DDB1-202ENST00000414411 ZNF337Q9Y3M9 751 aa8.92□□□□□ -0.98
DDB1-202ENST00000414411 ZGRF1Q86YA3 2104 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 TMED7-TICAM2A0A0A6YYA0 188 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 A0A1B0GVC2 190 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 DAPL1A0PJW8 107 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 CD8B2A6NJW9 211 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 VSTM5A8MXK1 200 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 SEC14L5O43304 696 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 RNF13O43567 381 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 NPIPB7O75200 414 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 RGS9O75916 674 aaPredicted RBP8.91□□□□□ -0.98
DDB1-202ENST00000414411 CRYABP02511 175 aaKnown RBP8.91□□□□□ -0.98
DDB1-202ENST00000414411 CD8BP10966 210 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 PNMTP11086 282 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 PEPDP12955 493 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 RAC2P15153 192 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 CFL1P23528 166 aaKnown RBP8.91□□□□□ -0.98
DDB1-202ENST00000414411 SLC6A6P31641 620 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 RFX2P48378 723 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 RPS7P62081 194 aaKnown RBP8.91□□□□□ -0.98
DDB1-202ENST00000414411 EGR4Q05215 589 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 CRYZQ08257 329 aaKnown RBP8.91□□□□□ -0.98
DDB1-202ENST00000414411 DBPQ10586 325 aaPredicted RBP8.91□□□□□ -0.98
DDB1-202ENST00000414411 ASAH1Q13510 395 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 ARHGAP11AQ6P4F7 1023 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 C1orf122Q6ZSJ8 110 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 TRILQ7L0X0 811 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 OR10H4Q8NGA5 316 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 TNFRSF13CQ96RJ3 184 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 ATF6BQ99941 703 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 PIGQQ9BRB3 760 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 OR51V1Q9H2C8 321 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 ADGRL4Q9HBW9 690 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 TRIM36Q9NQ86 728 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 TMED7Q9Y3B3 224 aa8.91□□□□□ -0.98
DDB1-202ENST00000414411 SIRT4Q9Y6E7 314 aaPredicted RBP8.91□□□□□ -0.98
DDB1-202ENST00000414411 IGKV1D-42A0A075B6H8 117 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 FAM47E-STBD1D6RA91 191 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 LINC01387J3KSC0 135 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 TFECO14948 347 aaPredicted RBP8.9□□□□□ -0.98
DDB1-202ENST00000414411 ZNF208O43345 1280 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 SUSD5O60279 629 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 TMCC2O75069 709 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 ATP6V1G1O75348 118 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 CSF3P09919 207 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 SBK2P0C263 348 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 CLUP10909 449 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 CXCR1P25024 350 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 SLC16A1P53985 500 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 SCN1BQ07699 218 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms