RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 KLHL30Q0D2K2 578 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 ASPHQ12797 758 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 PPIL2Q13356 520 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 PARP15Q460N3 678 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 DNAJC21Q5F1R6 531 aaKnown RBP2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 PAGE3Q5JUK9 113 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 AGBL2Q5U5Z8 902 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 CYB5R2Q6BCY4 276 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 TMEM225Q6GV28 225 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 KCNIP4Q6PIL6 250 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 TMIGD1Q6UXZ0 262 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 ZNF720Q7Z2F6 126 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 ZNF571Q7Z3V5 609 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 TMEM161BQ8NDZ6 487 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 OR8K1Q8NGG5 319 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 TRMT10AQ8TBZ6 339 aaKnown RBP2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 EMG1Q92979 244 aaKnown RBP2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 TSGA13Q96PP4 275 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 OR11A1Q9GZK7 315 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 GOLPH3Q9H4A6 298 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 NHEJ1Q9H9Q4 299 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 PALMDQ9NP74 551 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 UFSP2Q9NUQ7 469 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 RAB26Q9ULW5 256 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 PRPF19Q9UMS4 504 aaKnown RBP2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 MRPS7Q9Y2R9 242 aaKnown RBP2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 POLDIP2Q9Y2S7 368 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 PRG3Q9Y2Y8 225 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 MICAL3Q7RTP6 2002 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 HELZP42694 1942 aaKnown RBP2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 DENND4CQ5VZ89 1909 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 SCN8AQ9UQD0 1980 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 ZNF106Q9H2Y7 1883 aaKnown RBP2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 ARHGEF35A5YM69 484 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 A6NIZ1 184 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 LRRIQ3A6PVS8 624 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 BTNL10A8MVZ5 291 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 NDC80O14777 642 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 SLC16A4O15374 487 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 GUCA1CO95843 209 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 ALOX5P09917 674 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 CHTF8P0CG12 524 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 POU2F1P14859 743 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 UCHL3P15374 230 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 CRISP2P16562 243 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 HNF1AP20823 631 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 GLRA2P23416 452 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 SHMT2P34897 504 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 QARSP47897 775 aaKnown RBP2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 CSNK1DP48730 415 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 RAP1BP61224 184 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 PSMC5P62195 406 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 VSNL1P62760 191 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 TGFBR3Q03167 851 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 C2orf54Q08AI8 447 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 UNC119Q13432 240 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 GPNMBQ14956 572 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 NRF1Q16656 503 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 FILIP1LQ4L180 1135 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 C10orf120Q5SQS8 335 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 OR2G6Q5TZ20 316 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 ACP7Q6ZNF0 438 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 CCDC80Q76M96 950 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 CCDC50Q8IVM0 306 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 SLC35F2Q8IXU6 374 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 OR6C4Q8NGE1 309 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 OR2T3Q8NH03 318 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 ERMNQ8TAM6 284 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 SHC3Q92529 594 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 PIGCQ92535 297 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 IL22RA2Q969J5 263 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 FAM210BQ96KR6 192 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 OR2M2Q96R28 347 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 KCNA7Q96RP8 456 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 NAPGQ99747 312 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 TSG101Q99816 390 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 P2RY13Q9BPV8 354 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 RASL11BQ9BPW5 248 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 CRACR2AQ9BSW2 395 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 NUP58Q9BVL2 599 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 PORCNQ9H237 461 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 LRRN3Q9H3W5 708 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 HAUS4Q9H6D7 363 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 PARVGQ9HBI0 331 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 ACP6Q9NPH0 428 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 LZTFL1Q9NQ48 299 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 GCNT4Q9P109 453 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 SH3BGRL2Q9UJC5 107 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 SNX12Q9UMY4 172 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 COPS3Q9UNS2 423 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 TP53TG5Q9Y2B4 290 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 COQ4Q9Y3A0 265 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 RPL36Q9Y3U8 105 aaKnown RBP2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 GBF1Q92538 1859 aa2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 GOLGB1Q14789 3259 aaKnown RBP2.39□□□□□ -2.03
HMGB1P11-201ENST00000413899 MIA3Q5JRA6 1907 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 DOCK4Q8N1I0 1966 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 SHROOM3Q8TF72 1996 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 TRBV6-6A0A0A6YYG2 114 aa2.38□□□□□ -2.03
HMGB1P11-201ENST00000413899 IGKV6-21A0A0C4DH24 114 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms