RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 PQLC3Q8N755 202 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 PRELID2Q8N945 189 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 SUMF2Q8NBJ7 301 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 RDH5Q92781 318 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 PIK3IP1Q96FE7 263 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 GABARAPL3Q9BY60 117 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 DNTTIP1Q9H147 329 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 ELOVL6Q9H5J4 265 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 RPF2Q9H7B2 306 aaKnown RBP3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 EML4Q9HC35 981 aaKnown RBP3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 SLCO1B3Q9NPD5 702 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 AHSPQ9NZD4 102 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 PLEKHG2Q9H7P9 1386 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 PDS5BQ9NTI5 1447 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 TRBV9A0A0B4J1U6 114 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 KRTAP4-16G5E9R7 235 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 L7N2F9 121 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 SLC31A2O15432 143 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 EIF4E2O60573 245 aaKnown RBP3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 AIFM1O95831 613 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 INSP01308 110 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 MGMTP16455 207 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 AK4P27144 223 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 CTRLP40313 264 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 OR1G1P47890 313 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 MRPL19P49406 292 aaKnown RBP3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 CRISP1P54107 249 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 STXBP1P61764 594 aaKnown RBP3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 GNB2P62879 340 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 RPS21P63220 83 aaKnown RBP3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 PAX5Q02548 391 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 IRF8Q02556 426 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 ITIH4Q14624 930 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 CLINT1Q14677 625 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 SF3A2Q15428 464 aaKnown RBP3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 ZSCAN26Q16670 478 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 ACP7Q6ZNF0 438 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 CMC1Q7Z7K0 106 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 TTC29Q8NA56 475 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 MARCH1Q8TCQ1 289 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 DNAJC19Q96DA6 116 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 P2RX4Q99571 388 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 SH3GL3Q99963 347 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 ECSITQ9BQ95 431 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 NANOGQ9H9S0 305 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 LYRM4Q9HD34 91 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 CHRAC1Q9NRG0 131 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 SLC25A37Q9NYZ2 338 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 DEC1Q9P2X7 70 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 TP53TG3Q9ULZ0 132 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 SLC17A4Q9Y2C5 497 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 KIF25-AS1Q9Y6Z4 181 aa3.34□□□□□ -1.87
HMGB3P31-201ENST00000413333 A0A0B4J2A0 478 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 KBTBD11-OT1A0A1B0GTJ5 212 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 HIDE1A8MVS5 230 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 TRAF3IP2O43734 574 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 AIREO43918 545 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 DPM1O60762 260 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 FGFR1OPO95684 399 aaKnown RBP3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 IGLV1-47P01700 117 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 LYZP61626 148 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 SLC25A11Q02978 314 aaKnown RBP3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 SGCAQ16586 387 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 HSDL1Q3SXM5 330 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 XKR4Q5GH76 650 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 AGBL2Q5U5Z8 902 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 PLCXD3Q63HM9 321 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 OR52W1Q6IF63 320 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 FRMPD2BQ6IN97 320 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 LINC00173Q6ZV60 143 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 PEX26Q7Z412 305 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 C11orf53Q8IXP5 236 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 ZNF321PQ8N8H1 164 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 OR10G9Q8NGN4 311 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 OR10R2Q8NGX6 335 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 DTX3LQ8TDB6 740 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 MCOLN3Q8TDD5 553 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 MYDGFQ969H8 173 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 IL22RA2Q969J5 263 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 KIAA1143Q96AT1 154 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 ISG20Q96AZ6 181 aaKnown RBP3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 DUS3LQ96G46 650 aaKnown RBP3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 SERPINB12Q96P63 405 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 XPO6Q96QU8 1125 aaKnown RBP3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 BCL7BQ9BQE9 202 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 ANKRD60Q9BZ19 345 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 UCK2Q9BZX2 261 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 ACTR3CQ9C0K3 210 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 NXF3Q9H4D5 531 aaKnown RBP3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 PDFQ9HBH1 243 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 TMEM165Q9HC07 324 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 MRPS30Q9NP92 439 aaKnown RBP3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 PXMP2Q9NR77 195 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 MMP26Q9NRE1 261 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 AGPAT4Q9NRZ5 378 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 CCDC59Q9P031 241 aaKnown RBP3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 CLN8Q9UBY8 286 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 PCYOX1Q9UHG3 505 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 SHPKQ9UHJ6 478 aa3.33□□□□□ -1.88
HMGB3P31-201ENST00000413333 LGALS13Q9UHV8 139 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms