RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 CCDC168Q8NDH2 2452 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 TEX13CA0A0J9YWL9 993 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 SLC22A23A1A5C7 686 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 ARRDC5A6NEK1 342 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 H7C1C5 153 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 IMPA2O14732 288 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 HS3ST1O14792 307 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 ARPC3O15145 178 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 PPP1R3DO95685 299 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 HLA-HP01893 362 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 RAF1P04049 648 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 CELA3BP08861 270 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 CBR1P16152 277 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 CD53P19397 219 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 PAX7P23759 505 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 LCN6P62502 163 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 CD47Q08722 323 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 KRR1Q13601 381 aaKnown RBP11.46□□□□□ -0.57
HDAC8-210ENST00000412342 ZNF672Q499Z4 452 aaPredicted RBP11.46□□□□□ -0.57
HDAC8-210ENST00000412342 THEM4Q5T1C6 240 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 C1orf146Q5VVC0 180 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 GPR139Q6DWJ6 353 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 B3GLCTQ6Y288 498 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 RASSF6Q6ZTQ3 369 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 PTCHD4Q6ZW05 846 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 MDP1Q86V88 176 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 CCDC36Q8IYA8 594 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 SLC22A24Q8N4F4 322 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 OR10G2Q8NGC3 310 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 OR8D4Q8NGM9 314 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 FNDC8Q8TC99 324 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 AKAP1Q92667 903 aaKnown RBP eCLIP11.46□□□□□ -0.57
HDAC8-210ENST00000412342 SAMD8Q96LT4 415 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 SLC38A2Q96QD8 506 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 PLA2G12AQ9BZM1 189 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 NDEL1Q9GZM8 345 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 EGLN3Q9H6Z9 239 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 UBTD1Q9HAC8 227 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 IL20Q9NYY1 176 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 VSX1Q9NZR4 365 aaPredicted RBP11.46□□□□□ -0.57
HDAC8-210ENST00000412342 GRHPRQ9UBQ7 328 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 IER3IP1Q9Y5U9 82 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 CDH10Q9Y6N8 788 aa11.46□□□□□ -0.57
HDAC8-210ENST00000412342 PRSS37A4D1T9 235 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 BHLHE40O14503 412 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 ARHGEF9O43307 516 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 AHCYL1O43865 530 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 TIPRLO75663 272 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 IGFBP1P08833 259 aaPredicted RBP11.45□□□□□ -0.58
HDAC8-210ENST00000412342 CECR9P0C854 216 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 DANCRP0C864 163 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 NR2C1P13056 603 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 SLC6A6P31641 620 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 MRPS34P82930 218 aaKnown RBP11.45□□□□□ -0.58
HDAC8-210ENST00000412342 CD300LDQ6UXZ3 194 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 C20orf204Q6ZNR8 217 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 HS3ST5Q8IZT8 346 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 ZNF611Q8N823 705 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 MBD6Q96DN6 1003 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 NIPSNAP1Q9BPW8 284 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 YY1AP1Q9H869 796 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 MOV10Q9HCE1 1003 aaKnown RBP11.45□□□□□ -0.58
HDAC8-210ENST00000412342 ARMC1Q9NVT9 282 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 DNAJB9Q9UBS3 223 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 MGAT4BQ9UQ53 548 aa11.45□□□□□ -0.58
HDAC8-210ENST00000412342 PRRC2AP48634 2157 aaKnown RBP11.44□□□□□ -0.58
HDAC8-210ENST00000412342 E7EQL1 145 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 ATP6V1G2-DDX39BF2Z307 99 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 SOCS2O14508 198 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 MMP7P09237 267 aaPredicted RBP11.44□□□□□ -0.58
HDAC8-210ENST00000412342 PATE4P0C8F1 98 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 OR8G3PP0DMU2 310 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 CTLA4P16410 223 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 ZNF14P17017 642 aaPredicted RBP11.44□□□□□ -0.58
HDAC8-210ENST00000412342 CALCRP30988 508 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 CDAP32320 146 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 ARR3P36575 388 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 CDKN2AP42771 156 aaKnown RBP11.44□□□□□ -0.58
HDAC8-210ENST00000412342 ZNF84P51523 738 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 IDH3GP51553 393 aaPredicted RBP11.44□□□□□ -0.58
HDAC8-210ENST00000412342 RPS6KA3P51812 740 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 NAAAQ02083 359 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 TESK1Q15569 626 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 ETFDHQ16134 617 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 GSG1Q2KHT4 349 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 ADCK1Q86TW2 530 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 ZNF584Q8IVC4 421 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 GIPC3Q8TF64 312 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 NSMAFQ92636 917 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 GTPBP3Q969Y2 492 aaKnown RBP11.44□□□□□ -0.58
HDAC8-210ENST00000412342 RADILQ96JH8 1075 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 ERMAPQ96PL5 475 aaPredicted RBP11.44□□□□□ -0.58
HDAC8-210ENST00000412342 RBP7Q96R05 134 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 SNX18Q96RF0 628 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 FEVQ99581 238 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 SH3GL3Q99963 347 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 SYT4Q9H2B2 425 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 REV1Q9UBZ9 1251 aa11.44□□□□□ -0.58
HDAC8-210ENST00000412342 XKRYO14609 159 aa11.43□□□□□ -0.58
HDAC8-210ENST00000412342 MGRN1O60291 552 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms