RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 BEST4Q8NFU0 473 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 ITFG1Q8TB96 612 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 ZNF564Q8TBZ8 553 aaPredicted RBP3.61□□□□□ -1.83
BRCA1-204ENST00000412061 ACER1Q8TDN7 264 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 RPEQ96AT9 228 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 LRRC45Q96CN5 670 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 SERPINB11Q96P15 392 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 BEX2Q9BXY8 128 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 CHRNA10Q9GZZ6 450 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 DRC3Q9H069 523 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 ARMC7Q9H6L4 198 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 PSTPIP2Q9H939 334 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 UCK1Q9HA47 277 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 FOLH1BQ9HBA9 442 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 FGF22Q9HCT0 170 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 PLCXD1Q9NUJ7 323 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 MCUBQ9NWR8 336 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 THAP10Q9P2Z0 257 aaPredicted RBP3.61□□□□□ -1.83
BRCA1-204ENST00000412061 SPRR3Q9UBC9 169 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 GNPTGQ9UJJ9 305 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 SPATA2Q9UM82 520 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 PLLPQ9Y342 182 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 HYOU1Q9Y4L1 999 aa3.61□□□□□ -1.83
BRCA1-204ENST00000412061 ADCY9O60503 1353 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 MROH7Q68CQ1 1323 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 IGKV1D-8A0A087WSZ0 117 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 A0A087WYN8 130 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 GLYATL1P3A0A0U1RQE8 302 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 PSMB11A5LHX3 300 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 H3BN98 237 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 H7C0C1 242 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 PRMT5O14744 637 aaPredicted RBP3.6□□□□□ -1.83
BRCA1-204ENST00000412061 TNFSF11O14788 317 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 MRPS12O15235 138 aaKnown RBP3.6□□□□□ -1.83
BRCA1-204ENST00000412061 EDIL3O43854 480 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 TDP2O95551 362 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 LDOC1O95751 146 aaPredicted RBP3.6□□□□□ -1.83
BRCA1-204ENST00000412061 IGKV3-20P01619 116 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 H2AFZP0C0S5 128 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 CFC1BP0CG36 223 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 CFC1P0CG37 223 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 PGAM1P18669 254 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 S100A5P33763 92 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 HMGCLP35914 325 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 UGT2B10P36537 528 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 CLDN6P56747 220 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 MLF1P58340 268 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 ABRAXAS2Q15018 415 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 ARL6IP1Q15041 203 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 ATP6V1FQ16864 119 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 NDUFAF6Q330K2 333 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 PARP15Q460N3 678 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 ZFP69Q49AA0 526 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 CDKL4Q5MAI5 379 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 MARCH8Q5T0T0 291 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 TIGD3Q6B0B8 471 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 GDPGP1Q6ZNW5 385 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 NOTCH2NLQ7Z3S9 236 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 SETD3Q86TU7 594 aaPredicted RBP3.6□□□□□ -1.83
BRCA1-204ENST00000412061 UNC93AQ86WB7 457 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 ZFAND4Q86XD8 727 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 C12orf56Q8IXR9 622 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 BOD1L2Q8IYS8 172 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 HSD17B11Q8NBQ5 300 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 FLVCR1-AS1Q8TAF5 88 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 ANKRD7Q92527 254 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 SMARCD2Q92925 531 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 SERPINB12Q96P63 405 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 FOXC2Q99958 501 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 RARRES2Q99969 163 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 BARHL1Q9BZE3 327 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 NXF3Q9H4D5 531 aaKnown RBP3.6□□□□□ -1.83
BRCA1-204ENST00000412061 TMEM38AQ9H6F2 299 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 RNF167Q9H6Y7 350 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 TIGARQ9NQ88 270 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 SIRT7Q9NRC8 400 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 IL20Q9NYY1 176 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 SENP1Q9P0U3 644 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 ING4Q9UNL4 249 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 GOLT1BQ9Y3E0 138 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 ANKRD30BQ9BXX2 1392 aa3.6□□□□□ -1.83
BRCA1-204ENST00000412061 FOXI3A8MTJ6 420 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-204ENST00000412061 PRAMEF26H0Y7S4 382 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 MKRN2OSH3BPM6 223 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 LINC01565O15544 149 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 COCHO43405 550 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 RHOCP08134 193 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 OCMP0CE72 109 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-204ENST00000412061 TBPP20226 339 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 TEAD1P28347 426 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 SHMT2P34897 504 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 GCKP35557 465 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 RBM34P42696 430 aaKnown RBP3.59□□□□□ -1.83
BRCA1-204ENST00000412061 MAGEA6P43360 314 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 SERPINB8P50452 374 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 CCR8P51685 355 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 SP4Q02446 784 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 GNA13Q14344 377 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 DMC1Q14565 340 aa3.59□□□□□ -1.83
BRCA1-204ENST00000412061 SLC10A1Q14973 349 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms