RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 NEIL3Q8TAT5 605 aa12.6□□□□□ -0.39
LIMS2-206ENST00000409754 ABHD4Q8TB40 342 aa12.6□□□□□ -0.39
LIMS2-206ENST00000409754 RPS4Y2Q8TD47 263 aa12.6□□□□□ -0.39
LIMS2-206ENST00000409754 FER1L6-AS2Q96M78 137 aa12.6□□□□□ -0.39
LIMS2-206ENST00000409754 KCNK17Q96T54 332 aa12.6□□□□□ -0.39
LIMS2-206ENST00000409754 KCNS3Q9BQ31 491 aa12.6□□□□□ -0.39
LIMS2-206ENST00000409754 PIGQQ9BRB3 760 aa12.6□□□□□ -0.39
LIMS2-206ENST00000409754 TSPAN10Q9H1Z9 355 aaPredicted RBP12.6□□□□□ -0.39
LIMS2-206ENST00000409754 SMURF1Q9HCE7 757 aa12.6□□□□□ -0.39
LIMS2-206ENST00000409754 ACOXLQ9NUZ1 547 aa12.6□□□□□ -0.39
LIMS2-206ENST00000409754 ABI3Q9P2A4 366 aa12.6□□□□□ -0.39
LIMS2-206ENST00000409754 LAMP5Q9UJQ1 280 aa12.6□□□□□ -0.39
LIMS2-206ENST00000409754 SPENQ96T58 3664 aaKnown RBP12.6□□□□□ -0.39
LIMS2-206ENST00000409754 ATRXP46100 2492 aa12.6□□□□□ -0.39
LIMS2-206ENST00000409754 SMG1Q96Q15 3661 aaKnown RBP12.6□□□□□ -0.39
LIMS2-206ENST00000409754 A0A0G2JMM0 328 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 LOC102725191A0A1B0GVB3 256 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 A0A1W2PPB8 328 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 A0A1W2PRS3 328 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 AQP7P3A6NL99 342 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 KIR3DP1A8MWS1 328 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 PRR32B1ATL7 298 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 K7ENP7 123 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 SULT2B1O00204 365 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 CASKO14936 926 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 RRP8O43159 456 aaKnown RBP12.59□□□□□ -0.39
LIMS2-206ENST00000409754 SC5DO75845 299 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 SULT1C4O75897 302 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 SERPINA3P01011 423 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 CD40LGP29965 261 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 CASRP41180 1078 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 ETV6P41212 452 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 GDI2P50395 445 aaKnown RBP12.59□□□□□ -0.39
LIMS2-206ENST00000409754 RAC1P63000 192 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 OC90Q02509 493 aaPredicted RBP12.59□□□□□ -0.39
LIMS2-206ENST00000409754 HNRNPA0Q13151 305 aaKnown RBP12.59□□□□□ -0.39
LIMS2-206ENST00000409754 INSL4Q14641 139 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 ABHD17BQ5VST6 288 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 INO80CQ6PI98 192 aaPredicted RBP12.59□□□□□ -0.39
LIMS2-206ENST00000409754 HDDC2Q7Z4H3 204 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 FAM220AQ7Z4H9 259 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 SNRNP27Q8WVK2 155 aaKnown RBP12.59□□□□□ -0.39
LIMS2-206ENST00000409754 GHSRQ92847 366 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 KIAA1143Q96AT1 154 aaPredicted RBP12.59□□□□□ -0.39
LIMS2-206ENST00000409754 TXNDC15Q96J42 360 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 OXGR1Q96P68 337 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 TPK1Q9H3S4 243 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 MED29Q9NX70 200 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 KLHL13Q9P2N7 655 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 KLHDC2Q9Y2U9 406 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 MRPS18CQ9Y3D5 142 aaKnown RBP12.59□□□□□ -0.39
LIMS2-206ENST00000409754 CACNA1BQ00975 2339 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 LRRC3CA6NJW4 275 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 HSPB2A8KAH6 182 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 GPRIN2O60269 458 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 ABHD16AO95870 558 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 HLA-DQA2P01906 255 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 CNR1P21554 472 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 EDNRAP25101 427 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 ITGA3P26006 1051 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 PTGS2P35354 604 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 MTNR1BP49286 362 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 ZNF45Q02386 682 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 GLO1Q04760 184 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 HSPB2Q16082 182 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 PAMR1Q6UXH9 720 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 DPY19L4Q7Z388 723 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 TEX19Q8NA77 164 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 OTOSQ8NHW6 89 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 ASB17Q8WXJ9 295 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 AP3S1Q92572 193 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 MRPL22Q9NWU5 206 aaKnown RBP12.59□□□□□ -0.39
LIMS2-206ENST00000409754 LRFN1Q9P244 771 aa12.59□□□□□ -0.39
LIMS2-206ENST00000409754 PLEKHB1Q9UF11 243 aaPredicted RBP12.59□□□□□ -0.39
LIMS2-206ENST00000409754 MRM2Q9UI43 246 aaKnown RBP12.59□□□□□ -0.39
LIMS2-206ENST00000409754 TRBV2A0A0J9YWF9 115 aa12.58□□□□□ -0.4
LIMS2-206ENST00000409754 SHISA3A0PJX4 238 aa12.58□□□□□ -0.4
LIMS2-206ENST00000409754 GJE1A6NN92 205 aa12.58□□□□□ -0.4
LIMS2-206ENST00000409754 ZNF593O00488 134 aaPredicted RBP12.58□□□□□ -0.4
LIMS2-206ENST00000409754 CDK2AP1O14519 115 aa12.58□□□□□ -0.4
LIMS2-206ENST00000409754 CTDSP2O14595 271 aa12.58□□□□□ -0.4
LIMS2-206ENST00000409754 TRAF3IP2O43734 574 aaPredicted RBP12.58□□□□□ -0.4
LIMS2-206ENST00000409754 KHDRBS3O75525 346 aaKnown RBP12.58□□□□□ -0.4
LIMS2-206ENST00000409754 GPANK1O95872 356 aa12.58□□□□□ -0.4
LIMS2-206ENST00000409754 KRT8P05787 483 aa12.58□□□□□ -0.4
LIMS2-206ENST00000409754 CD96P40200 585 aa12.58□□□□□ -0.4
LIMS2-206ENST00000409754 PPP5CP53041 499 aa12.58□□□□□ -0.4
LIMS2-206ENST00000409754 BIDP55957 195 aa12.58□□□□□ -0.4
LIMS2-206ENST00000409754 B3GALT5-AS1P59052 145 aa12.58□□□□□ -0.4
LIMS2-206ENST00000409754 ETFDHQ16134 617 aa12.58□□□□□ -0.4
LIMS2-206ENST00000409754 TMEM225Q6GV28 225 aa12.58□□□□□ -0.4
LIMS2-206ENST00000409754 BTLAQ7Z6A9 289 aa12.58□□□□□ -0.4
LIMS2-206ENST00000409754 CCDC190Q86UF4 302 aa12.58□□□□□ -0.4
LIMS2-206ENST00000409754 UTP23Q9BRU9 249 aaKnown RBP12.58□□□□□ -0.4
LIMS2-206ENST00000409754 MRPL13Q9BYD1 178 aaKnown RBP12.58□□□□□ -0.4
LIMS2-206ENST00000409754 PRORYQ9H606 182 aa12.58□□□□□ -0.4
LIMS2-206ENST00000409754 DEPPQ9NTK1 212 aa12.58□□□□□ -0.4
LIMS2-206ENST00000409754 RASD1Q9Y272 281 aa12.58□□□□□ -0.4
LIMS2-206ENST00000409754 DOCK10Q96BY6 2186 aa12.57□□□□□ -0.4
LIMS2-206ENST00000409754 ZNF814B7Z6K7 855 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms