RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 GAB2Q9UQC2 676 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 C16orf97H3BN30 126 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 WDR1O75083 606 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 IGHV4-34P06331 123 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 IMPA1P29218 277 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 OPCMLQ14982 345 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 PTPRRQ15256 657 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 TAF9Q16594 264 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 FCRLAQ7L513 359 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 SFTPA1Q8IWL2 248 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 LRRC18Q8N456 261 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 FAM26EQ8N5C1 309 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 SLC24A4Q8NFF2 622 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 ARRDC2Q8TBH0 407 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 MROQ9BYG7 248 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 NDRG4Q9ULP0 352 aaKnown RBP6.69□□□□□ -1.34
SCN9A-202ENST00000409435 SLC7A7Q9UM01 511 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 TSPAN11A1L157 253 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 M0R2Z0 102 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 TLX2O43763 284 aaPredicted RBP6.69□□□□□ -1.34
SCN9A-202ENST00000409435 NDUFB7P17568 137 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 NFYBP25208 207 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 TAGLN2P37802 199 aaKnown RBP6.69□□□□□ -1.34
SCN9A-202ENST00000409435 ZNF83P51522 516 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 BMXP51813 675 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 SELPLGQ14242 412 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 RNPS1Q15287 305 aaKnown RBP6.69□□□□□ -1.34
SCN9A-202ENST00000409435 ADAM5Q6NVV9 412 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 DHRS11Q6UWP2 260 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 RELL1Q8IUW5 271 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 ZNF547Q8IVP9 402 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 C15orf54Q8N8G6 183 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 GLIS1Q8NBF1 620 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 SPACA9Q96E40 222 aaPredicted RBP6.69□□□□□ -1.34
SCN9A-202ENST00000409435 NKX3-1Q99801 234 aaPredicted RBP6.69□□□□□ -1.34
SCN9A-202ENST00000409435 ALG12Q9BV10 488 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 TSSK6Q9BXA6 273 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 TOLLIPQ9H0E2 274 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 EVA1AQ9H8M9 152 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 DCAF16Q9NXF7 216 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 VAPAQ9P0L0 249 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 FLVCR2Q9UPI3 526 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 ANTXRLA6NF34 631 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 POM121CA8CG34 1229 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 SEC14L2O76054 403 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 AIFM1O95831 613 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 MT-ND4LP03901 98 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 PTNP21246 168 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 OPRL1P41146 370 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 AGFG1P52594 562 aaKnown RBP6.69□□□□□ -1.34
SCN9A-202ENST00000409435 RHBDD2Q6NTF9 364 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 ZC3H3Q8IXZ2 948 aaKnown RBP6.69□□□□□ -1.34
SCN9A-202ENST00000409435 LMO3Q8TAP4 145 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 CHAC2Q8WUX2 184 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 RNF141Q8WVD5 230 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 C22orf15Q8WYQ4 148 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 FAM46BQ96A09 425 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 FOXRED1Q96CU9 486 aaPredicted RBP6.69□□□□□ -1.34
SCN9A-202ENST00000409435 GLRX2Q9NS18 164 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 ARL2-SNX15V9GYD0 113 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 CDK5RAP2Q96SN8 1893 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 ZNF850A8MQ14 1090 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 M0QZK8 103 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 PHOX2AO14813 284 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 GGCTO75223 188 aaKnown RBP6.68□□□□□ -1.34
SCN9A-202ENST00000409435 LGI1O95970 557 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 IL1AP01583 271 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 HLA-HP01893 362 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 RAC2P15153 192 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 TNFRSF1AP19438 455 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 DSCR4P56555 118 aaPredicted RBP6.68□□□□□ -1.34
SCN9A-202ENST00000409435 CTXN1P60606 82 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 LIPKQ5VXJ0 399 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 LILRA2Q8N149 483 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 SIGLECL1Q8N7X8 197 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 OR2V1Q8NHB1 315 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 GNPDA2Q8TDQ7 276 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 ASB11Q8WXH4 323 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 NT5C3BQ969T7 300 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 SRA1Q9HD15 236 aaKnown RBP6.68□□□□□ -1.34
SCN9A-202ENST00000409435 ZFP64Q9NPA5 681 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 MEPEQ9NQ76 525 aaPredicted RBP6.68□□□□□ -1.34
SCN9A-202ENST00000409435 KLHL13Q9P2N7 655 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 OR5V1Q9UGF6 321 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 CHRNA9Q9UGM1 479 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 SLC22A7Q9Y694 548 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 ECM29Q5VYK3 1845 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 A0A1B0GTH9 108 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 A0A1W2PPV4 95 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 CXCL13O43927 109 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 DRD5P21918 477 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 ARR3P36575 388 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 TSFMP43897 325 aaKnown RBP6.68□□□□□ -1.34
SCN9A-202ENST00000409435 MAP2K4P45985 399 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 AKR1C2P52895 323 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 H3F3AP84243 136 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 GK3PQ14409 553 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 PDZD11Q5EBL8 140 aa6.68□□□□□ -1.34
SCN9A-202ENST00000409435 ATPAF1Q5TC12 328 aaPredicted RBP6.68□□□□□ -1.34
SCN9A-202ENST00000409435 CST9LP1Q5W188 147 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms