RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 CCR6P51684 374 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 SP4Q02446 784 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 MADCAM1Q13477 382 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 LY6DQ14210 128 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 DCAF4L1Q3SXM0 396 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 SYT14P1Q58G82 188 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 C9orf152Q5JTZ5 239 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 DCST1Q5T197 706 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 HENMT1Q5T8I9 393 aaKnown RBP4.94□□□□□ -1.62
CLK1-202ENST00000409403 AADACL4Q5VUY2 407 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 OR5M10Q6IEU7 315 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 RAB12Q6IQ22 244 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 TRIM40Q6P9F5 258 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 ZNF613Q6PF04 617 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 RBMS3Q6XE24 437 aaKnown RBP4.94□□□□□ -1.62
CLK1-202ENST00000409403 Q6ZPA2 131 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 TAC4Q86UU9 113 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 PARGQ86W56 976 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 KLBQ86Z14 1044 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 ARHGAP12Q8IWW6 846 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 KCNRGQ8N5I3 272 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 TCEANCQ8N8B7 351 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 OR52J3Q8NH60 311 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 OR6X1Q8NH79 312 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 STOML3Q8TAV4 291 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 NEU4Q8WWR8 484 aaPredicted RBP4.94□□□□□ -1.62
CLK1-202ENST00000409403 ARRDC3Q96B67 414 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 TADA1Q96BN2 335 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 S100PBPQ96BU1 408 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 DAZAP1Q96EP5 407 aaKnown RBP4.94□□□□□ -1.62
CLK1-202ENST00000409403 C14orf144Q96I85 54 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 ZNF582Q96NG8 517 aaPredicted RBP4.94□□□□□ -1.62
CLK1-202ENST00000409403 MACROD1Q9BQ69 325 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 MGME1Q9BQP7 344 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 TMED9Q9BVK6 235 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 GGACTQ9BVM4 153 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 KRTAP9-3Q9BYQ3 159 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 TKTL2Q9H0I9 626 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 POLR2J3Q9H1A7 115 aaKnown RBP4.94□□□□□ -1.62
CLK1-202ENST00000409403 RERGLQ9H628 205 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 TMEM38AQ9H6F2 299 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 KRCC1Q9NPI7 259 aaPredicted RBP4.94□□□□□ -1.62
CLK1-202ENST00000409403 MMP26Q9NRE1 261 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 TMEM161AQ9NX61 479 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 WWOXQ9NZC7 414 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 KLHL9Q9P2J3 617 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 OARD1Q9Y530 152 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 POMT1Q9Y6A1 747 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 ATG2BQ96BY7 2078 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 LRBAP50851 2863 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 FLNCQ14315 2725 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 TLN1Q9Y490 2541 aaKnown RBP4.94□□□□□ -1.62
CLK1-202ENST00000409403 ASCC3Q8N3C0 2202 aaKnown RBP4.93□□□□□ -1.62
CLK1-202ENST00000409403 IGKV6-21A0A0C4DH24 114 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 SMIM30A4D0T7 59 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 BTBD17A6NE02 478 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 COLCA2A8K830 154 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 GABARAPH6UMI1 98 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 CLDN4O14493 209 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 PRRG1O14668 218 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 ARPC1BO15143 372 aaKnown RBP4.93□□□□□ -1.62
CLK1-202ENST00000409403 OR2T1O43869 369 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 SH3BGRLO75368 114 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 CLDN9O95484 217 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 HEXBP07686 556 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 CSF1P09603 554 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 C1GALT1C1LP0DN25 315 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 INSRRP14616 1297 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 EPCAMP16422 314 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 IGFBP2P18065 325 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 SDC1P18827 310 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 CRABP1P29762 137 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 IFNGR2P38484 337 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 CEACAM6P40199 344 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 RBM34P42696 430 aaKnown RBP4.93□□□□□ -1.62
CLK1-202ENST00000409403 PTGER3P43115 390 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 CRATP43155 626 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 GLP1RP43220 463 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 ART1P52961 327 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 OAZ1P54368 228 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 CAV3P56539 151 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 HMGCS1Q01581 520 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 MBTD1Q05BQ5 628 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 TMEM115Q12893 351 aaPredicted RBP4.93□□□□□ -1.62
CLK1-202ENST00000409403 ALKBH1Q13686 389 aaKnown RBP4.93□□□□□ -1.62
CLK1-202ENST00000409403 SCARB2Q14108 478 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 RGNQ15493 299 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 TMEM255AQ5JRV8 349 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 SIRPB2Q5JXA9 342 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 UBE2NLQ5JXB2 153 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 MARC1Q5VT66 337 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 ZNF770Q6IQ21 691 aaPredicted RBP4.93□□□□□ -1.62
CLK1-202ENST00000409403 C11orf88Q6PI97 169 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 TMIGD1Q6UXZ0 262 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 Q6ZTK2 550 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 CAMKMTQ7Z624 323 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 LDB1Q86U70 411 aaPredicted RBP4.93□□□□□ -1.62
CLK1-202ENST00000409403 C10orf111Q8N326 155 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 ZBTB2Q8N680 514 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 RASGEF1AQ8N9B8 481 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms