RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 LCTLQ6UWM7 567 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 IL22RA1Q8N6P7 574 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 PMCHP20382 165 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 BLVRBP30043 206 aaPredicted RBP12.85□□□□□ -0.35
AFF3-202ENST00000409236 GJA4P35212 333 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 ADPRMQ3LIE5 342 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 EMC10Q5UCC4 262 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 SDR9C7Q8NEX9 313 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 SEC22AQ96IW7 307 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 LPAR4Q99677 370 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 BARHL1Q9BZE3 327 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 DLL4Q9NR61 685 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 MRPS28Q9Y2Q9 187 aaKnown RBP12.85□□□□□ -0.35
AFF3-202ENST00000409236 FAM183AA6NL82 134 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 ZNF264O43296 627 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 RPEL1Q2QD12 228 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 DYNC2LI1Q8TCX1 351 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 SEC11CQ9BY50 192 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 AAMDCQ9H7C9 122 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 SHPRHQ149N8 1683 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 TMEM218A2RU14 115 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 CCR6P51684 374 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 RNASEKQ6P5S7 137 aaKnown RBP12.85□□□□□ -0.35
AFF3-202ENST00000409236 OR2AE1Q8NHA4 323 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 KHSRPQ92945 711 aaKnown RBP eCLIP12.85□□□□□ -0.35
AFF3-202ENST00000409236 MMP26Q9NRE1 261 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 ING1Q9UK53 422 aaPredicted RBP12.85□□□□□ -0.35
AFF3-202ENST00000409236 NPY4RP50391 375 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 ZNF528Q3MIS6 628 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 MS4A10Q96PG2 267 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 TARBP1Q13395 1621 aaKnown RBP12.85□□□□□ -0.35
AFF3-202ENST00000409236 A0A1B0GV72 72 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 TRDV1A0A1B0GX56 115 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 NXPH2O95156 264 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 DOC2AQ14183 400 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 PRR27Q6MZM9 219 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 TMEM106AQ96A25 262 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 FAM3DQ96BQ1 224 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 RPUSD4Q96CM3 377 aaKnown RBP12.85□□□□□ -0.35
AFF3-202ENST00000409236 MENTQ9BUN1 341 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 SPATA31A5Q5VU36 1347 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 SPATA31A7Q8IWB4 1347 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 A0A1B0GTQ1 180 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 HSPB6O14558 160 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 RNGTTO60942 597 aaKnown RBP12.85□□□□□ -0.35
AFF3-202ENST00000409236 VEGFAP15692 232 aaPredicted RBP12.85□□□□□ -0.35
AFF3-202ENST00000409236 CCR9P51686 369 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 SLC22A12Q96S37 553 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 FAM234AQ9H0X4 552 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 NOX4Q9NPH5 578 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 CYB5R1Q9UHQ9 305 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 PTGDR2Q9Y5Y4 395 aa12.85□□□□□ -0.35
AFF3-202ENST00000409236 FOLR3P41439 243 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 OR3A1P47881 315 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 KDM4DQ6B0I6 523 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 TMEM88Q6PEY1 159 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 GIMAP2Q9UG22 337 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 HSD17B6O14756 317 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 CASP7P55210 303 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 C21orf62-AS1Q17RA5 79 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 BCL2L2Q92843 193 aaPredicted RBP12.84□□□□□ -0.35
AFF3-202ENST00000409236 TMIGD2Q96BF3 282 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 PINX1Q96BK5 328 aaKnown RBP12.84□□□□□ -0.35
AFF3-202ENST00000409236 FAM171A2A8MVW0 826 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 MEOX2P50222 304 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 EXT1Q16394 746 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 HSPB8Q9UJY1 196 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 TOX3O15405 576 aaPredicted RBP12.84□□□□□ -0.35
AFF3-202ENST00000409236 C21orf33P30042 268 aaPredicted RBP12.84□□□□□ -0.35
AFF3-202ENST00000409236 PDE7AQ13946 482 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 AMIGO3Q86WK7 504 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 OR5AP2Q8NGF4 316 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 AP1G1O43747 822 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 ALPLP05186 524 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 ERHP84090 104 aaKnown RBP12.84□□□□□ -0.35
AFF3-202ENST00000409236 PHLDA2Q53GA4 152 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 DTWD2Q8NBA8 298 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 OR4C16Q8NGL9 310 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 DUS3LQ96G46 650 aaKnown RBP12.84□□□□□ -0.35
AFF3-202ENST00000409236 BCO2Q9BYV7 579 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 OR52D1Q9H346 318 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 TUBGCP6Q96RT7 1819 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 RNF225M0QZC1 329 aaPredicted RBP12.84□□□□□ -0.35
AFF3-202ENST00000409236 POU3F3P20264 500 aaPredicted RBP12.84□□□□□ -0.35
AFF3-202ENST00000409236 IDUAP35475 653 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 DHRS13Q6UX07 377 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 OR6M1Q8NGM8 313 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 TCTN2Q96GX1 697 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 MYO7BQ6PIF6 2116 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 H0YIV9 168 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 PSMB6P28072 239 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 LGALS4P56470 323 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 MS4A2Q01362 244 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 CARFQ8N187 725 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 SLC39A7Q92504 469 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 SNX11Q9Y5W9 270 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 N4BP2Q86UW6 1770 aaPredicted RBP12.84□□□□□ -0.35
AFF3-202ENST00000409236 C3P01024 1663 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 LYSMD2Q8IV50 215 aa12.84□□□□□ -0.35
AFF3-202ENST00000409236 L3MBTL4Q8NA19 623 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms