RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 DNAJA4Q8WW22 397 aaPredicted RBP14.06□□□□□ -0.16
CHMP3-203ENST00000409225 IPCEF1Q8WWN9 437 aaPredicted RBP14.06□□□□□ -0.16
CHMP3-203ENST00000409225 SLC35B4Q969S0 331 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 PKNOX2Q96KN3 472 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 DIRC2Q96SL1 478 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 EPYCQ99645 322 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 NUF2Q9BZD4 464 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 PATZ1Q9HBE1 687 aaKnown RBP14.06□□□□□ -0.16
CHMP3-203ENST00000409225 MRPL39Q9NYK5 338 aaKnown RBP14.06□□□□□ -0.16
CHMP3-203ENST00000409225 ADORA3P0DMS8 318 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 APLNRP35414 380 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 SLC6A9P48067 706 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 ZNF718Q3SXZ3 478 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 SLC36A2Q495M3 483 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 GTDC1Q4AE62 458 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 ZNF362Q5T0B9 420 aaPredicted RBP14.05□□□□□ -0.16
CHMP3-203ENST00000409225 THEM4Q5T1C6 240 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 ULK3Q6PHR2 472 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 LRFN4Q6PJG9 635 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 C9orf139Q6ZV77 190 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 NUDCD3Q8IVD9 361 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 KLHL36Q8N4N3 616 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 SPICQ8N5J4 248 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 LSMEM1Q8N8F7 131 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 RBM15BQ8NDT2 890 aaKnown RBP14.05□□□□□ -0.16
CHMP3-203ENST00000409225 OR4F5Q8NH21 305 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 SLC47A1Q96FL8 570 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 ZBTB18Q99592 522 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 RBM4BQ9BQ04 359 aaKnown RBP14.05□□□□□ -0.16
CHMP3-203ENST00000409225 TPT1P8Q9HAU6 139 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 SELENONQ9NZV5 590 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 TANC2Q9HCD6 1990 aa14.05□□□□□ -0.16
CHMP3-203ENST00000409225 WDR91A4D1P6 747 aa14.04□□□□□ -0.16
CHMP3-203ENST00000409225 DHHO43323 396 aa14.04□□□□□ -0.16
CHMP3-203ENST00000409225 ANP32DO95626 131 aa14.04□□□□□ -0.16
CHMP3-203ENST00000409225 CRYBA1P05813 215 aa14.04□□□□□ -0.16
CHMP3-203ENST00000409225 NUDT7P0C024 238 aa14.04□□□□□ -0.16
CHMP3-203ENST00000409225 CD80P33681 288 aa14.04□□□□□ -0.16
CHMP3-203ENST00000409225 ABCE1P61221 599 aaKnown RBP14.04□□□□□ -0.16
CHMP3-203ENST00000409225 HSF2Q03933 536 aa14.04□□□□□ -0.16
CHMP3-203ENST00000409225 MELKQ14680 651 aa14.04□□□□□ -0.16
CHMP3-203ENST00000409225 FBLN7Q53RD9 439 aa14.04□□□□□ -0.16
CHMP3-203ENST00000409225 SLC35D2Q76EJ3 337 aa14.04□□□□□ -0.16
CHMP3-203ENST00000409225 DPPA2Q7Z7J5 298 aa14.04□□□□□ -0.16
CHMP3-203ENST00000409225 COMTD1Q86VU5 262 aa14.04□□□□□ -0.16
CHMP3-203ENST00000409225 OR6X1Q8NH79 312 aa14.04□□□□□ -0.16
CHMP3-203ENST00000409225 MAL2Q969L2 176 aa14.04□□□□□ -0.16
CHMP3-203ENST00000409225 ZNF566Q969W8 418 aa14.04□□□□□ -0.16
CHMP3-203ENST00000409225 AIG1Q9NVV5 245 aa14.04□□□□□ -0.16
CHMP3-203ENST00000409225 OR5V1Q9UGF6 321 aa14.04□□□□□ -0.16
CHMP3-203ENST00000409225 RAP2CQ9Y3L5 183 aa14.04□□□□□ -0.16
CHMP3-203ENST00000409225 TRAV40A0A0B4J280 105 aa14.03□□□□□ -0.16
CHMP3-203ENST00000409225 A8MXK9 166 aa14.03□□□□□ -0.16
CHMP3-203ENST00000409225 RPL14P50914 215 aaKnown RBP14.03□□□□□ -0.16
CHMP3-203ENST00000409225 KRTAP10-3P60369 221 aa14.03□□□□□ -0.16
CHMP3-203ENST00000409225 NCALDP61601 193 aa14.03□□□□□ -0.16
CHMP3-203ENST00000409225 PAX8Q06710 450 aa14.03□□□□□ -0.16
CHMP3-203ENST00000409225 ESCO2Q56NI9 601 aa14.03□□□□□ -0.16
CHMP3-203ENST00000409225 FAM91A1Q658Y4 838 aa14.03□□□□□ -0.16
CHMP3-203ENST00000409225 ASPHD2Q6ICH7 369 aa14.03□□□□□ -0.16
CHMP3-203ENST00000409225 FIP1L1Q6UN15 594 aaKnown RBP14.03□□□□□ -0.16
CHMP3-203ENST00000409225 ZNF101Q8IZC7 436 aa14.03□□□□□ -0.16
CHMP3-203ENST00000409225 LRRC18Q8N456 261 aa14.03□□□□□ -0.16
CHMP3-203ENST00000409225 OR5J2Q8NH18 312 aa14.03□□□□□ -0.16
CHMP3-203ENST00000409225 BBS10Q8TAM1 723 aa14.03□□□□□ -0.16
CHMP3-203ENST00000409225 SLC25A40Q8TBP6 338 aa14.03□□□□□ -0.16
CHMP3-203ENST00000409225 ZDHHC16Q969W1 377 aa14.03□□□□□ -0.16
CHMP3-203ENST00000409225 VPS33AQ96AX1 596 aa14.03□□□□□ -0.16
CHMP3-203ENST00000409225 MARS2Q96GW9 593 aaKnown RBP14.03□□□□□ -0.16
CHMP3-203ENST00000409225 RSPO3Q9BXY4 272 aaPredicted RBP14.03□□□□□ -0.16
CHMP3-203ENST00000409225 C20orf27Q9GZN8 174 aa14.03□□□□□ -0.16
CHMP3-203ENST00000409225 TMEM106BQ9NUM4 274 aa14.03□□□□□ -0.16
CHMP3-203ENST00000409225 THUMPD1Q9NXG2 353 aaKnown RBP14.03□□□□□ -0.16
CHMP3-203ENST00000409225 NBEAL2Q6ZNJ1 2754 aa14.02□□□□□ -0.16
CHMP3-203ENST00000409225 OR6A2O95222 327 aa14.02□□□□□ -0.17
CHMP3-203ENST00000409225 SERPINE1P05121 402 aa14.02□□□□□ -0.17
CHMP3-203ENST00000409225 ADH4P08319 380 aa14.02□□□□□ -0.17
CHMP3-203ENST00000409225 QDPRP09417 244 aa14.02□□□□□ -0.17
CHMP3-203ENST00000409225 WNT5AP41221 380 aa14.02□□□□□ -0.17
CHMP3-203ENST00000409225 TNFAIP6P98066 277 aaPredicted RBP14.02□□□□□ -0.17
CHMP3-203ENST00000409225 RELBQ01201 579 aa14.02□□□□□ -0.17
CHMP3-203ENST00000409225 DEFB112Q30KQ8 113 aa14.02□□□□□ -0.17
CHMP3-203ENST00000409225 TMEM155Q4W5P6 130 aa14.02□□□□□ -0.17
CHMP3-203ENST00000409225 OGFOD2Q6N063 350 aa14.02□□□□□ -0.17
CHMP3-203ENST00000409225 OR2J1Q9GZK6 312 aa14.02□□□□□ -0.17
CHMP3-203ENST00000409225 MARCH7Q9H992 704 aa14.02□□□□□ -0.17
CHMP3-203ENST00000409225 MEAF6Q9HAF1 191 aa14.02□□□□□ -0.17
CHMP3-203ENST00000409225 MSL2Q9HCI7 577 aa14.02□□□□□ -0.17
CHMP3-203ENST00000409225 BCL2L10Q9HD36 194 aa14.02□□□□□ -0.17
CHMP3-203ENST00000409225 CYSLTR2Q9NS75 346 aa14.02□□□□□ -0.17
CHMP3-203ENST00000409225 C1RLQ9NZP8 487 aa14.02□□□□□ -0.17
CHMP3-203ENST00000409225 TRIM33Q9UPN9 1127 aa14.02□□□□□ -0.17
CHMP3-203ENST00000409225 KMT2CQ8NEZ4 4911 aaKnown RBP14.01□□□□□ -0.17
CHMP3-203ENST00000409225 A0A0B4J2E0 115 aa14.01□□□□□ -0.17
CHMP3-203ENST00000409225 A0A1B0GX12 115 aa14.01□□□□□ -0.17
CHMP3-203ENST00000409225 CLPSL1A2RUU4 121 aa14.01□□□□□ -0.17
CHMP3-203ENST00000409225 C5orf58C9J3I9 102 aa14.01□□□□□ -0.17
CHMP3-203ENST00000409225 F5H0A9 414 aaPredicted RBP14.01□□□□□ -0.17
CHMP3-203ENST00000409225 TGDSO95455 350 aa14.01□□□□□ -0.17
CHMP3-203ENST00000409225 PLATP00750 562 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms