RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ZDHHC5Q9C0B5 715 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 ZNF286AQ9HBT8 521 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 NUP214P35658 2090 aaPredicted RBP16.24■□□□□ 0.19
SMPD4-202ENST00000409031 MT-CO2P00403 227 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 KLKB1P03952 638 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 ZNF626Q68DY1 528 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 MFSD9Q8NBP5 474 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 DCBLD2Q96PD2 775 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 NPAS1Q99742 590 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 PLEKHA2Q9HB19 425 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 B3GALT5Q9Y2C3 310 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 LOXHD1Q8IVV2 1947 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 OR5M9Q8NGP3 310 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 OR2G3Q8NGZ4 309 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 HPSE2Q8WWQ2 592 aa16.24■□□□□ 0.19
SMPD4-202ENST00000409031 GCDHQ92947 438 aaPredicted RBP16.24■□□□□ 0.19
SMPD4-202ENST00000409031 ELF4Q99607 663 aaPredicted RBP16.24■□□□□ 0.19
SMPD4-202ENST00000409031 SUSD5O60279 629 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 ZNF273Q14593 569 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 RPUSD3Q6P087 351 aaKnown RBP16.23■□□□□ 0.19
SMPD4-202ENST00000409031 LILRB1Q8NHL6 650 aaPredicted RBP16.23■□□□□ 0.19
SMPD4-202ENST00000409031 FOXN4Q96NZ1 517 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 OR6C76A6NM76 312 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 ZNF724A8MTY0 619 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 H7C1C5 153 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 ST8SIA3O43173 380 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 TNFSF12O43508 249 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 LILRB5O75023 590 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 RPA2P15927 270 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 BLVRBP30043 206 aaPredicted RBP16.23■□□□□ 0.19
SMPD4-202ENST00000409031 FCGR2CP31995 323 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 WNT3P56703 355 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 LCN6P62502 163 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 TRILQ7L0X0 811 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 LGI3Q8N145 548 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 Q96M85 177 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 TCRBV16S1A1N1A0A5B0 115 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 TMEM218A2RU14 115 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 PLPP2O43688 288 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 SFTA3P0C7M3 94 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 RPL12P30050 165 aaKnown RBP16.23■□□□□ 0.19
SMPD4-202ENST00000409031 HOXC12P31275 282 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 ABHD17CQ6PCB6 329 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 FAM111BQ6SJ93 734 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 OR11H7Q8NGC8 314 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 PIGQQ9BRB3 760 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 ULBP3Q9BZM4 244 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 PLEKHA3Q9HB20 300 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 C7orf66A4D0T2 115 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 FGF18O76093 207 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 ZNF93P35789 620 aaPredicted RBP16.23■□□□□ 0.19
SMPD4-202ENST00000409031 MALLQ13021 153 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 USB1Q9BQ65 265 aaKnown RBP16.23■□□□□ 0.19
SMPD4-202ENST00000409031 PLA2G12AQ9BZM1 189 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 PDE7BQ9NP56 450 aa16.23■□□□□ 0.19
SMPD4-202ENST00000409031 TIMM8BQ9Y5J9 83 aaPredicted RBP16.23■□□□□ 0.19
SMPD4-202ENST00000409031 TRBV5-4A0A0C4DH59 114 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 TP53I11O14683 189 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 CHRM4P08173 479 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 GDI1P31150 447 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 PLP2Q04941 152 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 OR6K3Q8NGY3 331 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 ZNF681Q96N22 645 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 RNGTTO60942 597 aaKnown RBP16.22■□□□□ 0.19
SMPD4-202ENST00000409031 TK1P04183 234 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 HOXB2P14652 356 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 COL13A1Q5TAT6 717 aaPredicted RBP16.22■□□□□ 0.19
SMPD4-202ENST00000409031 TMEM65Q6PI78 240 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 TMEM156Q8N614 296 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 C15orf54Q8N8G6 183 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 RASD2Q96D21 266 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 SLC39A9Q9NUM3 307 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 CGGBP1Q9UFW8 167 aaPredicted RBP16.22■□□□□ 0.19
SMPD4-202ENST00000409031 A4GNTQ9UNA3 340 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 F5H5K5 113 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 ETHE1O95571 254 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 HLA-HP01893 362 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 ZNF728P0DKX0 622 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 EFNA3P52797 238 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 MVDP53602 400 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 PCBP4P57723 403 aaKnown RBP16.22■□□□□ 0.19
SMPD4-202ENST00000409031 CLDN2P57739 230 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 RPS18P62269 152 aaKnown RBP16.22■□□□□ 0.19
SMPD4-202ENST00000409031 SFRP5Q5T4F7 317 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 CD300LDQ6UXZ3 194 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 LILRA3Q8N6C8 439 aaPredicted RBP16.22■□□□□ 0.19
SMPD4-202ENST00000409031 LYSMD1Q96S90 227 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 C19orf25Q9UFG5 118 aaPredicted RBP16.22■□□□□ 0.19
SMPD4-202ENST00000409031 DKKL1Q9UK85 242 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 EMC9Q9Y3B6 208 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 MYH14Q7Z406 1995 aaKnown RBP16.22■□□□□ 0.19
SMPD4-202ENST00000409031 DDX60Q8IY21 1712 aaKnown RBP16.22■□□□□ 0.19
SMPD4-202ENST00000409031 SERINC4A6NH21 518 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 FGF7P21781 194 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 RFC3P40938 356 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 NOGQ13253 232 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 RAB31Q13636 194 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 GPNMBQ14956 572 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 OR2T2Q6IF00 324 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms