RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 SUCLG1P53597 346 aaKnown RBP7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 FAM3AP98173 230 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 SLC6A18Q96N87 628 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 OR5B2Q96R09 309 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 MMACHCQ9Y4U1 282 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 MELTFP08582 738 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 TOR2AQ5JU69 321 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 ZNF761Q86XN6 746 aaPredicted RBP7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 SLC38A9Q8NBW4 561 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 PEBP4Q96S96 227 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 PKMYT1Q99640 499 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 GJB4Q9NTQ9 266 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 ZNF629Q9UEG4 869 aaPredicted RBP7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 DNMT1P26358 1616 aaKnown RBP7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 PJVKQ0ZLH3 352 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 KLF1Q13351 362 aaPredicted RBP7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 PLAG1Q6DJT9 500 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 NPNTQ6UXI9 565 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 TMEM230Q96A57 120 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 NEIL1Q96FI4 390 aaPredicted RBP7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 FBXL20Q96IG2 436 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 UFC1Q9Y3C8 167 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 ZNF749O43361 778 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 NTSR2O95665 410 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 C6orf47O95873 294 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 LIPFP07098 398 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 ACAA2P42765 397 aaKnown RBP7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 SOX10P56693 466 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 SNRPNP63162 240 aaKnown RBP7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 ELOCQ15369 112 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 SLC7A5P1Q8MH63 180 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 RIOX1Q9H6W3 641 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 NUDT21O43809 227 aaKnown RBP7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 OPN1SWP03999 348 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 CRYBA1P05813 215 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 GNB1P62873 340 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 SHC2P98077 582 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 SAPCD1Q5SSQ6 148 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 SSX8Q7RTT4 187 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 TBC1D26Q86UD7 250 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 OR5AP2Q8NGF4 316 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 TMEM9BQ9NQ34 198 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 MANBALQ9NQG1 85 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 PISDQ9UG56 409 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 BOKQ9UMX3 212 aaPredicted RBP7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 SHANK1Q9Y566 2161 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 SLC15A5A6NIM6 579 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 DOC2BQ14184 412 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 NUP43Q8NFH3 380 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 OR52P1PQ8NH57 321 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 NKX2-4Q9H2Z4 354 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 SEBOXQ9HB31 216 aaPredicted RBP7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 B3GALT5Q9Y2C3 310 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 TMEM184BQ9Y519 407 aaPredicted RBP7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 FCN1O00602 326 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 BCAT2O15382 392 aaPredicted RBP7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 NSDHLQ15738 373 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 FKBP11Q9NYL4 201 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 PLCE1Q9P212 2302 aa7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 GDF2Q9UK05 429 aaPredicted RBP7.98□□□□□ -1.13
CACNA1C-220ENST00000399655 OR7C1O76099 320 aaPredicted RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 CHRM4P08173 479 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 TMEM249Q2WGJ8 235 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 FAM234AQ9H0X4 552 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 TNS3Q68CZ2 1445 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 SLC25A20O43772 301 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 EEDO75530 441 aaKnown RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 NXPH2O95156 264 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 ZNF25P17030 456 aaPredicted RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 GABRA5P31644 462 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 SRYQ05066 204 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 HNRNPA1L2Q32P51 320 aaKnown RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 CD276Q5ZPR3 534 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 OR9A1PQ8NGU1 263 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 SLC39A7Q92504 469 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 RAB1BQ9H0U4 201 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 I6L893 689 aaPredicted RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 ATP1B2P14415 290 aaPredicted RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 SLC5A2P31639 672 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 GPLD1P80108 840 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 TFAP2EQ6VUC0 442 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 THYN1Q9P016 225 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 C1orf226A1L170 272 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 FBLL1A6NHQ2 334 aaKnown RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 MAFO75444 373 aaPredicted RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 NAGAP17050 411 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 ARHGEF39Q8N4T4 335 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 C10orf82Q8WW14 230 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 MCHR2Q969V1 340 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 PURBQ96QR8 312 aaKnown RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 DUSP9Q99956 384 aaKnown RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 DPH7Q9BTV6 452 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 P2RY12Q9H244 342 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 TRAV34A0A0B4J273 112 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 SERPINE3A8MV23 424 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 PRDX5P30044 214 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 BEX5Q5H9J7 111 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 CYHR1Q6ZMK1 362 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 APCDD1Q8J025 514 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 CNIH3Q8TBE1 160 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms