RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 FBXL6Q8N531 539 aa11.08□□□□□ -0.64
CACNA1C-213ENST00000399629 OR4F15Q8NGB8 312 aa11.08□□□□□ -0.64
CACNA1C-213ENST00000399629 ST8SIA2Q92186 375 aa11.08□□□□□ -0.64
CACNA1C-213ENST00000399629 GTF2H4Q92759 462 aa11.08□□□□□ -0.64
CACNA1C-213ENST00000399629 NT5C3BQ969T7 300 aa11.08□□□□□ -0.64
CACNA1C-213ENST00000399629 KIRREL1Q96J84 757 aa11.08□□□□□ -0.64
CACNA1C-213ENST00000399629 ISYNA1Q9NPH2 558 aa11.08□□□□□ -0.64
CACNA1C-213ENST00000399629 LAMB4A4D0S4 1761 aa11.08□□□□□ -0.64
CACNA1C-213ENST00000399629 ATXN7O15265 892 aaPredicted RBP11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 COX6B1P14854 86 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 ETV4P43268 484 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 OGFOD3Q6PK18 319 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 DTWD1Q8N5C7 304 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 SUMF2Q8NBJ7 301 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 SDR39U1Q9NRG7 319 aaPredicted RBP11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 YBX2Q9Y2T7 364 aaKnown RBP11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 A0A1W2PS29 197 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 FURINP09958 794 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 C21orf33P30042 268 aaPredicted RBP11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 CNIH2Q6PI25 160 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 TMEM65Q6PI78 240 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 PAQR9Q6ZVX9 377 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 PDZD9Q8IXQ8 264 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 BPIFB2Q8N4F0 458 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 FAM71CQ8NEG0 241 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 PCED1AQ9H1Q7 454 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 GFYI3L273 518 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 TFP02787 698 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 AADACP22760 399 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 SLC19A1P41440 591 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 C2orf76Q3KRA6 126 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 ZNF529Q6P280 563 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 PFDN5Q99471 154 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 RAB1BQ9H0U4 201 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 HES4Q9HCC6 221 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 CPNE5Q9HCH3 593 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 A0A087WZY1 265 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 TGM1P22735 817 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 RPL27P61353 136 aaKnown RBP11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 PRAMEF5Q5TYX0 476 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 PRAMEF6Q5VXH4 476 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 LRFN5Q96NI6 719 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 EMC6Q9BV81 110 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 BABAM2Q9NXR7 383 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 GLTPQ9NZD2 209 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 PCDHGA7Q9Y5G6 932 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 BTAF1O14981 1849 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 MYH3P11055 1940 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 ARPC1BO15143 372 aaKnown RBP11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 ST6GAL1P15907 406 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 MAP2K6P52564 334 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 FAM198BQ6UWH4 519 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 TSLPQ969D9 159 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 LHPPQ9H008 270 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 KCNIP2Q9NS61 270 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 PLCH1Q4KWH8 1693 aa11.07□□□□□ -0.64
CACNA1C-213ENST00000399629 PHF1O43189 567 aaPredicted RBP11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 ICOSLGO75144 302 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 ZNF254O75437 659 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 ZNF93P35789 620 aaPredicted RBP11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 GFERP55789 205 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 PROX2Q3B8N5 592 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 CCL4L1Q8NHW4 92 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 ARL11Q969Q4 196 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 S1PR3Q99500 378 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 KIF13AQ9H1H9 1805 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 TNFRSF10AO00220 468 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 SRPXP78539 464 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 FJX1Q86VR8 437 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 TMEM255BQ8WV15 326 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 VAPAQ9P0L0 249 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 OR7A17O14581 309 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 ZNF195O14628 629 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 SPDEFO95238 335 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 GUSBP08236 651 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 HMGA1P17096 107 aaKnown RBP11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 GABRG2P18507 467 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 BMP5P22003 454 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 KDM8Q8N371 416 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 TMEM230Q96A57 120 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 RASD2Q96D21 266 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 PLEKHF2Q9H8W4 249 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 EMC7Q9NPA0 242 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 NLKQ9UBE8 527 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 TRBV4-1A0A0J9YWV2 114 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 CXCL10P02778 98 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 HLA-DOBP13765 273 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 ZNF83P51522 516 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 LHFPL2Q6ZUX7 228 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 PTRH1Q86Y79 214 aaKnown RBP11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 ZNF573Q86YE8 665 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 SLCO4A1Q96BD0 722 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 LRRC61Q9BV99 259 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 A4GALTQ9NPC4 353 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 MTCH1Q9NZJ7 389 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 PHIPQ8WWQ0 1821 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 SCN11AQ9UI33 1791 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 LRIT2A6NDA9 550 aa11.06□□□□□ -0.64
CACNA1C-213ENST00000399629 TPT1P13693 172 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms