RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 DEFB126Q9BYW3 111 aa15.94■□□□□ 0.14
HLA-DQB1-204ENST00000399084 CCDC86Q9H6F5 360 aaKnown RBP15.94■□□□□ 0.14
HLA-DQB1-204ENST00000399084 NIPAL2Q9H841 368 aa15.94■□□□□ 0.14
HLA-DQB1-204ENST00000399084 SLCO1C1Q9NYB5 712 aa15.94■□□□□ 0.14
HLA-DQB1-204ENST00000399084 KLRF1Q9NZS2 232 aa15.94■□□□□ 0.14
HLA-DQB1-204ENST00000399084 EMC3Q9P0I2 261 aa15.94■□□□□ 0.14
HLA-DQB1-204ENST00000399084 RPH3AQ9Y2J0 694 aaPredicted RBP15.94■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ALG5Q9Y673 324 aa15.94■□□□□ 0.14
HLA-DQB1-204ENST00000399084 A0A0B4J293 547 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 GSTT2BP0CG30 244 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ARSBP15848 533 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 GPR85P60893 370 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 RRAS2P62070 204 aaPredicted RBP15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 EXT1Q16394 746 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 MEP1BQ16820 701 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 KRT74Q7RTS7 529 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 KRT77Q7Z794 578 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 LRRTM1Q86UE6 522 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 CMTM4Q8IZR5 234 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ZNF433Q8N7K0 673 aaPredicted RBP15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ELP5Q8TE02 316 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ASB10Q8WXI3 467 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 UPRTQ96BW1 309 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 C8orf44Q96CB5 159 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 RNF31Q96EP0 1072 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 GFI1Q99684 422 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 COL25A1Q9BXS0 654 aaPredicted RBP15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 OR11A1Q9GZK7 315 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 SLC17A5Q9NRA2 495 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 NUFIP1Q9UHK0 495 aaKnown RBP15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 KCNG2Q9UJ96 466 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 WIF1Q9Y5W5 379 aa15.93■□□□□ 0.14
HLA-DQB1-204ENST00000399084 EXPH5Q8NEV8 1989 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 MEGF11A6BM72 1044 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 LIPT2A6NK58 231 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 PSMD9O00233 223 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 KHDRBS3O75525 346 aaKnown RBP15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 CFIP05156 583 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 SYPP08247 313 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ZNF823P16415 610 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ERP29P30040 261 aaKnown RBP15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 CAPZA1P52907 286 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ADAM8P78325 824 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 TLE3Q04726 772 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 PHF19Q5T6S3 580 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ASB18Q6ZVZ8 466 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 SYT9Q86SS6 491 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 HSD17B8Q92506 261 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 HAVCR1Q96D42 359 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 SPACA9Q96E40 222 aaPredicted RBP15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ZFP3Q96NJ6 502 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 KCNK17Q96T54 332 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 CMKLR1Q99788 373 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 TSPAN10Q9H1Z9 355 aaPredicted RBP15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 PTGES2Q9H7Z7 377 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 METTL7AQ9H8H3 244 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 LIN7BQ9HAP6 207 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 MRPL22Q9NWU5 206 aaKnown RBP15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 MED11Q9P086 117 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 FOXJ3Q9UPW0 622 aa15.92■□□□□ 0.14
HLA-DQB1-204ENST00000399084 A0A087WZY1 265 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 C7orf66A4D0T2 115 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ANXA2P2A6NMY6 339 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 D6RAR5 112 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 LANCL1O43813 399 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 CD2P06729 351 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ANXA2P07355 339 aaKnown RBP15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 TFPIP10646 304 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 CTLA4P16410 223 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 DCTDP32321 178 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 HSF1Q00613 529 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 MC2RQ01718 297 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ZFP36L1Q07352 338 aaKnown RBP15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 SNTB2Q13425 540 aaKnown RBP15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 MADCAM1Q13477 382 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 TOMM20Q15388 145 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ZNF239Q16600 458 aaKnown RBP15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 PLPPR5Q32ZL2 321 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 SLC35D2Q76EJ3 337 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 NOXA1Q86UR1 476 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ZNF227Q86WZ6 799 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 OR52N5Q8NH56 324 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 AKAP1Q92667 903 aaKnown RBP eCLIP15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 TMEM106AQ96A25 262 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 GUCD1Q96NT3 240 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ANKRD10Q9NXR5 420 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 LOC102725191A0A1B0GVB3 256 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ZNF354AO60765 605 aaPredicted RBP15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 DKK1O94907 266 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 PLGP00747 810 aaPredicted RBP15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ISG15P05161 165 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 SPARCP09486 303 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 CD37P11049 281 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 MRPS15P82914 257 aaKnown RBP15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 ZXDAP98168 799 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 OR7A5Q15622 319 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 BCL2A1Q16548 175 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 SLC23A3Q6PIS1 610 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 OPN5Q6U736 354 aa15.91■□□□□ 0.14
HLA-DQB1-204ENST00000399084 RHOUQ7L0Q8 258 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms