RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 NKIRAS2Q9NYR9 191 aa16.59■□□□□ 0.25
CHRFAM7A-202ENST00000397827 CYB5R1Q9UHQ9 305 aa16.59■□□□□ 0.25
CHRFAM7A-202ENST00000397827 TSPAN2O60636 221 aa16.58■□□□□ 0.25
CHRFAM7A-202ENST00000397827 BGLAPP02818 100 aa16.58■□□□□ 0.25
CHRFAM7A-202ENST00000397827 SLC6A8P48029 635 aa16.58■□□□□ 0.25
CHRFAM7A-202ENST00000397827 OR52I2Q8NH67 350 aa16.58■□□□□ 0.25
CHRFAM7A-202ENST00000397827 MVB12AQ96EY5 273 aa16.58■□□□□ 0.25
CHRFAM7A-202ENST00000397827 MESP1Q9BRJ9 268 aa16.58■□□□□ 0.25
CHRFAM7A-202ENST00000397827 VN1R1Q9GZP7 353 aa16.58■□□□□ 0.25
CHRFAM7A-202ENST00000397827 OR5V1Q9UGF6 321 aa16.58■□□□□ 0.25
CHRFAM7A-202ENST00000397827 KCNG2Q9UJ96 466 aa16.58■□□□□ 0.25
CHRFAM7A-202ENST00000397827 RCE1Q9Y256 329 aa16.58■□□□□ 0.25
CHRFAM7A-202ENST00000397827 WDFY3Q8IZQ1 3526 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 IGHV3-20A0A0C4DH32 117 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 IFNA7P01567 189 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 HLA-DQA2P01906 255 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 MAS1P04201 325 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ALOX5APP20292 161 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 STOMP27105 288 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 CENPAP49450 140 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 EPHA4P54764 986 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 EMC4Q5J8M3 183 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 TMEM255AQ5JRV8 349 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 EEF1A1P5Q5VTE0 462 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 C16orf47Q6ZP98 133 aaPredicted RBP16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 CADM4Q8NFZ8 388 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 C1orf216Q8TAB5 229 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SYNPRQ8TBG9 265 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SLC22A8Q8TCC7 542 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 NSMAFQ92636 917 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ATOH1Q92858 354 aaPredicted RBP16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 DAZLQ92904 295 aaKnown RBP16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 OR51J1Q9H342 316 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 KLK11Q9UBX7 282 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 UBQLN2Q9UHD9 624 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 PRELID3BQ9Y3B1 194 aa16.58■□□□□ 0.24
CHRFAM7A-202ENST00000397827 GSTZ1O43708 216 aaPredicted RBP16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 GMDSO60547 372 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SLC25A12O75746 678 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SCRN3Q0VDG4 424 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SLC35D2Q76EJ3 337 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 OR2G2Q8NGZ5 317 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SHARPINQ9H0F6 387 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 TTYH1Q9H313 450 aaPredicted RBP16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SLCO1C1Q9NYB5 712 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 COPS7AQ9UBW8 275 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 CTSFQ9UBX1 484 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 VPS13AQ96RL7 3174 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 TRAV8-7A0A075B6U6 113 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ALG1L2C9J202 215 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 CTDSPLO15194 276 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SSTR2P30874 369 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 NUP62P37198 522 aaPredicted RBP16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 FAM209BQ5JX69 171 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 OR5M10Q6IEU7 315 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 PWWP2BQ6NUJ5 590 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 BAIAP2L2Q6UXY1 529 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 CHMP1BQ7LBR1 199 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 PLXDC1Q8IUK5 500 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 OIT3Q8WWZ8 545 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 METTL21AQ8WXB1 218 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SORCS2Q96PQ0 1159 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 INTS14Q96SY0 518 aa16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 CLEC4MQ9H2X3 399 aaPredicted RBP16.57■□□□□ 0.24
CHRFAM7A-202ENST00000397827 TRAV36DV7A0A075B6V5 113 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 PRSS44E7EML9 344 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 H2AFB2P0C5Z0 115 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 RAB3AP20336 220 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ZP3P21754 424 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 BCKDHBP21953 392 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 GSG1Q2KHT4 349 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 COL28A1Q2UY09 1125 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SLC29A4Q7RTT9 530 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 LILRB2Q8N423 598 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ZNF676Q8N7Q3 588 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 PTDSS2Q9BVG9 487 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 OR11A1Q9GZK7 315 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SLC6A15Q9H2J7 730 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 FLVCR2Q9UPI3 526 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 FKBP7Q9Y680 259 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 OR4C45A6NMZ5 311 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 H0YC42 278 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 XKRYO14609 159 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 DUX1O43812 170 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 CDC40O60508 579 aaKnown RBP eCLIP16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ACSM4P0C7M7 580 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 DCAF7P61962 342 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SMAD4Q13485 552 aaKnown RBP16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ST3GAL2Q16842 350 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 LRRN1Q6UXK5 716 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 TFAP2EQ6VUC0 442 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 TMPRSS12Q86WS5 348 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 PRSS35Q8N3Z0 413 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SLC25A45Q8N413 288 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 D2HGDHQ8N465 521 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 OR1N1Q8NGS0 311 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 TMEM106AQ96A25 262 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 CCDC74AQ96AQ1 378 aa16.56■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SUSD5O60279 629 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 RAD1O60671 282 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms