RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 FOXB1Q99853 325 aa14.03□□□□□ -0.16
CLTA-203ENST00000396603 RSPO3Q9BXY4 272 aaPredicted RBP14.03□□□□□ -0.16
CLTA-203ENST00000396603 MRPL37Q9BZE1 423 aaKnown RBP14.03□□□□□ -0.16
CLTA-203ENST00000396603 ULBP2Q9BZM5 246 aa14.03□□□□□ -0.16
CLTA-203ENST00000396603 TRIM15Q9C019 465 aa14.03□□□□□ -0.16
CLTA-203ENST00000396603 DCAF13Q9NV06 445 aaKnown RBP14.03□□□□□ -0.16
CLTA-203ENST00000396603 REV1Q9UBZ9 1251 aa14.03□□□□□ -0.16
CLTA-203ENST00000396603 SLC7A8Q9UHI5 535 aa14.03□□□□□ -0.16
CLTA-203ENST00000396603 FAM32AQ9Y421 112 aaKnown RBP14.03□□□□□ -0.16
CLTA-203ENST00000396603 SLC22A23A1A5C7 686 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 MGRN1O60291 552 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 RAB36O95755 333 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 HPRP00739 348 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 HLA-HP01893 362 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 CD79AP11912 226 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 ITGA2P17301 1181 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 IL2RGP31785 369 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 SRP14P37108 136 aaKnown RBP14.02□□□□□ -0.17
CLTA-203ENST00000396603 CDH12P55289 794 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 TMEM33P57088 247 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 BNIP1Q12981 228 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 PMS2P3Q13401 168 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 NPTX1Q15818 432 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 NRN1LQ496H8 165 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 PHYHD1Q5SRE7 291 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 GLCCI1Q86VQ1 547 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 ZCCHC24Q8N2G6 241 aaKnown RBP14.02□□□□□ -0.17
CLTA-203ENST00000396603 FAM156AQ8NDB6 213 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 OR6N1Q8NGY5 312 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 RDH5Q92781 318 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 MCUR1Q96AQ8 359 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 HSH2DQ96JZ2 352 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 BTBD10Q9BSF8 475 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 SLC19A3Q9BZV2 496 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 RACGAP1Q9H0H5 632 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 C1orf198Q9H425 327 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 ACTR3BQ9P1U1 418 aa14.02□□□□□ -0.17
CLTA-203ENST00000396603 GMPR2Q9P2T1 348 aaKnown RBP14.02□□□□□ -0.17
CLTA-203ENST00000396603 ZNF346Q9UL40 294 aaKnown RBP14.02□□□□□ -0.17
CLTA-203ENST00000396603 SH3PXD2BA1X283 911 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 PLPP3O14495 311 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 ARPC2O15144 300 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 TPST2O60704 377 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 HLA-DOBP13765 273 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 RBM34P42696 430 aaKnown RBP14.01□□□□□ -0.17
CLTA-203ENST00000396603 OR1E2P47887 323 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 CSNK1A1P48729 337 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 RAB1AP62820 205 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 ST3GAL3Q11203 375 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 TRIM25Q14258 630 aaKnown RBP14.01□□□□□ -0.17
CLTA-203ENST00000396603 ELFN2Q5R3F8 820 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 TTC33Q6PID6 262 aaPredicted RBP14.01□□□□□ -0.17
CLTA-203ENST00000396603 LINC00114Q6XXX2 140 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 DHFR2Q86XF0 187 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 RBM45Q8IUH3 476 aaKnown RBP14.01□□□□□ -0.17
CLTA-203ENST00000396603 OR4D11Q8NGI4 311 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 OR5J2Q8NH18 312 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 OR6X1Q8NH79 312 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 PRRC1Q96M27 445 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 THTPAQ9BU02 230 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 EMC6Q9BV81 110 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 ZNF416Q9BWM5 594 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 MED29Q9NX70 200 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 ZNF224Q9NZL3 707 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 GPR160Q9UJ42 338 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 SLC7A7Q9UM01 511 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 NBEAL1Q6ZS30 2694 aa14.01□□□□□ -0.17
CLTA-203ENST00000396603 HTR3EA5X5Y0 456 aa14□□□□□ -0.17
CLTA-203ENST00000396603 SEC14L2O76054 403 aa14□□□□□ -0.17
CLTA-203ENST00000396603 SERPINA5P05154 406 aa14□□□□□ -0.17
CLTA-203ENST00000396603 B4GALT1P15291 398 aa14□□□□□ -0.17
CLTA-203ENST00000396603 GPR6P46095 362 aaPredicted RBP14□□□□□ -0.17
CLTA-203ENST00000396603 PTDSS1P48651 473 aaKnown RBP14□□□□□ -0.17
CLTA-203ENST00000396603 ZP4Q12836 540 aa14□□□□□ -0.17
CLTA-203ENST00000396603 CAMK2DQ13557 499 aa14□□□□□ -0.17
CLTA-203ENST00000396603 TRIP10Q15642 601 aa14□□□□□ -0.17
CLTA-203ENST00000396603 CARD17Q5XLA6 110 aa14□□□□□ -0.17
CLTA-203ENST00000396603 VTCN1Q7Z7D3 282 aa14□□□□□ -0.17
CLTA-203ENST00000396603 ASB9Q96DX5 294 aa14□□□□□ -0.17
CLTA-203ENST00000396603 MS4A3Q96HJ5 214 aa14□□□□□ -0.17
CLTA-203ENST00000396603 PYURFQ96I23 114 aa14□□□□□ -0.17
CLTA-203ENST00000396603 LRGUKQ96M69 825 aa14□□□□□ -0.17
CLTA-203ENST00000396603 MOGAT1Q96PD6 335 aa14□□□□□ -0.17
CLTA-203ENST00000396603 WFDC6Q9BQY6 131 aa14□□□□□ -0.17
CLTA-203ENST00000396603 FNDC11Q9BVV2 318 aa14□□□□□ -0.17
CLTA-203ENST00000396603 TPK1Q9H3S4 243 aa14□□□□□ -0.17
CLTA-203ENST00000396603 RIMS3Q9UJD0 308 aa14□□□□□ -0.17
CLTA-203ENST00000396603 METRNQ9UJH8 293 aa14□□□□□ -0.17
CLTA-203ENST00000396603 DNAJC8O75937 253 aaPredicted RBP13.99□□□□□ -0.17
CLTA-203ENST00000396603 PTHP01270 115 aa13.99□□□□□ -0.17
CLTA-203ENST00000396603 HOXB6P17509 224 aaKnown RBP13.99□□□□□ -0.17
CLTA-203ENST00000396603 TNFRSF1BP20333 461 aa13.99□□□□□ -0.17
CLTA-203ENST00000396603 CBLP22681 906 aa13.99□□□□□ -0.17
CLTA-203ENST00000396603 GIPRP48546 466 aa13.99□□□□□ -0.17
CLTA-203ENST00000396603 TRAP1Q12931 704 aaKnown RBP13.99□□□□□ -0.17
CLTA-203ENST00000396603 MSMPQ1L6U9 139 aa13.99□□□□□ -0.17
CLTA-203ENST00000396603 C10orf53Q8N6V4 93 aa13.99□□□□□ -0.17
CLTA-203ENST00000396603 TMEM54Q969K7 222 aa13.99□□□□□ -0.17
CLTA-203ENST00000396603 TMEM186Q96B77 213 aa13.99□□□□□ -0.17
CLTA-203ENST00000396603 TXNDC15Q96J42 360 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms