RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 PDLIM3Q53GG5 364 aaPredicted RBP14.34□□□□□ -0.11
GNE-202ENST00000396594 SMIM15Q7Z3B0 74 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 KANSL1Q7Z3B3 1105 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 RNF150Q9ULK6 438 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 MEIOCA2RUB1 952 aa14.33□□□□□ -0.11
GNE-202ENST00000396594 OR2A25A4D2G3 310 aa14.33□□□□□ -0.11
GNE-202ENST00000396594 LILRB5O75023 590 aa14.33□□□□□ -0.11
GNE-202ENST00000396594 NUDT7P0C024 238 aa14.33□□□□□ -0.11
GNE-202ENST00000396594 ZNF26P17031 533 aaPredicted RBP14.33□□□□□ -0.11
GNE-202ENST00000396594 GPR155Q7Z3F1 870 aa14.33□□□□□ -0.11
GNE-202ENST00000396594 MDGA2Q7Z553 956 aa14.33□□□□□ -0.11
GNE-202ENST00000396594 OR6K3Q8NGY3 331 aa14.33□□□□□ -0.11
GNE-202ENST00000396594 SIRT5Q9NXA8 310 aa14.33□□□□□ -0.11
GNE-202ENST00000396594 GPR55Q9Y2T6 319 aaPredicted RBP14.33□□□□□ -0.11
GNE-202ENST00000396594 A0A1W2PR48 441 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 FAM171A2A8MVW0 826 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 C1orf196B1AJZ1 125 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 FAPQ12884 760 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 FCRLAQ7L513 359 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 OR4A16Q8NH70 328 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 NXPH2O95156 264 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 HLA-AP01891 365 aaKnown RBP14.33□□□□□ -0.12
GNE-202ENST00000396594 SBK2P0C263 348 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 ACSM1Q08AH1 577 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 DOK4Q8TEW6 326 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 UTP4Q969X6 686 aaKnown RBP14.33□□□□□ -0.12
GNE-202ENST00000396594 GABRG3Q99928 467 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 FGF20Q9NP95 211 aaPredicted RBP14.33□□□□□ -0.12
GNE-202ENST00000396594 NDRG3Q9UGV2 375 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 ZAR1LA6NP61 321 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 ST8SIA5O15466 376 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 CSO75390 466 aaKnown RBP14.33□□□□□ -0.12
GNE-202ENST00000396594 CBX7O95931 251 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 LAP3P28838 519 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 DDOSTP39656 456 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 Q8IYB0 196 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 TMEM130Q8N3G9 435 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 TEX19Q8NA77 164 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 FAM3DQ96BQ1 224 aa14.33□□□□□ -0.12
GNE-202ENST00000396594 DHCR7Q9UBM7 475 aaKnown RBP14.33□□□□□ -0.12
GNE-202ENST00000396594 CPEP16870 476 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 SSTR4P31391 388 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 TAGLN2P37802 199 aaKnown RBP14.32□□□□□ -0.12
GNE-202ENST00000396594 RBP2P50120 134 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 SLC14A1Q13336 389 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 AADACL3Q5VUY0 350 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 LSRQ86X29 649 aaPredicted RBP14.32□□□□□ -0.12
GNE-202ENST00000396594 ARHGEF39Q8N4T4 335 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 NLGN4YQ8NFZ3 816 aaPredicted RBP14.32□□□□□ -0.12
GNE-202ENST00000396594 MACROD1Q9BQ69 325 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 A0A0A6YYD5 115 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 ZNF891A8MT65 544 aaPredicted RBP14.32□□□□□ -0.12
GNE-202ENST00000396594 APEHP13798 732 aaKnown RBP14.32□□□□□ -0.12
GNE-202ENST00000396594 TBXA2RP21731 343 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 SNCAP37840 140 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 TFAP2EQ6VUC0 442 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 PHC2Q8IXK0 858 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 DEFB123Q8N688 67 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 ZNF486Q96H40 463 aaPredicted RBP14.32□□□□□ -0.12
GNE-202ENST00000396594 TMEM202A6NGA9 273 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 OR7C1O76099 320 aaPredicted RBP14.32□□□□□ -0.12
GNE-202ENST00000396594 PTGER4P35408 488 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 PLA2G7Q13093 441 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 CD276Q5ZPR3 534 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 TRAT1Q6PIZ9 186 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 SLC22A25Q6T423 547 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 SHISA6Q6ZSJ9 500 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 MARCH3Q86UD3 253 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 SLC16A11Q8NCK7 471 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 TMEM255BQ8WV15 326 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 PFDN5Q99471 154 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 TUBB1Q9H4B7 451 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 GLRX2Q9NS18 164 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 GNG12Q9UBI6 72 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 K7EPK0 472 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 BCKDHBP21953 392 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 MEP1BQ16820 701 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 TMEM196Q5HYL7 178 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 MAVSQ7Z434 540 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 COMMD7Q86VX2 200 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 ZNF679Q8IYX0 411 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 FAM71E2Q8N5Q1 922 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 EXD3Q8N9H8 876 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 NMNAT3Q96T66 252 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 SLC17A5Q9NRA2 495 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 NDUFB11Q9NX14 153 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 VSX1Q9NZR4 365 aaPredicted RBP14.32□□□□□ -0.12
GNE-202ENST00000396594 RGPD4Q7Z3J3 1758 aa14.32□□□□□ -0.12
GNE-202ENST00000396594 TRAV17A0A0B4J275 112 aa14.31□□□□□ -0.12
GNE-202ENST00000396594 J3KTA2 159 aa14.31□□□□□ -0.12
GNE-202ENST00000396594 GJB3O75712 270 aa14.31□□□□□ -0.12
GNE-202ENST00000396594 MMP11P24347 488 aa14.31□□□□□ -0.12
GNE-202ENST00000396594 TRIM23P36406 574 aa14.31□□□□□ -0.12
GNE-202ENST00000396594 DHODHQ02127 395 aa14.31□□□□□ -0.12
GNE-202ENST00000396594 ERV3-1Q14264 604 aa14.31□□□□□ -0.12
GNE-202ENST00000396594 RNPS1Q15287 305 aaKnown RBP14.31□□□□□ -0.12
GNE-202ENST00000396594 PNLIPRP3Q17RR3 467 aa14.31□□□□□ -0.12
GNE-202ENST00000396594 TMEM211Q6ICI0 200 aa14.31□□□□□ -0.12
GNE-202ENST00000396594 COX15Q7KZN9 410 aa14.31□□□□□ -0.12
GNE-202ENST00000396594 ARPC5LQ9BPX5 153 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms