RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 WDYHV1Q96HA8 205 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 DEFB127Q9H1M4 99 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 BABAM2Q9NXR7 383 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 COA3Q9Y2R0 106 aaPredicted RBP11.3□□□□□ -0.6
TRIM39-204ENST00000396548 FLVCR1Q9Y5Y0 555 aa11.3□□□□□ -0.6
TRIM39-204ENST00000396548 BOD1L1Q8NFC6 3051 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 IGKV3D-15A0A087WSY6 115 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 TVP23AA6NH52 213 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 ACOT7O00154 380 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 EIF1AXP47813 144 aaKnown RBP11.29□□□□□ -0.6
TRIM39-204ENST00000396548 BLVRAP53004 296 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 HSF2Q03933 536 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 CAMK2DQ13557 499 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 ZNF169Q14929 603 aaPredicted RBP11.29□□□□□ -0.6
TRIM39-204ENST00000396548 SPCS2Q15005 226 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 TEX30Q5JUR7 227 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 HDDC2Q7Z4H3 204 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 ZADH2Q8N4Q0 377 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 ROBO4Q8WZ75 1007 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 TAAR6Q96RI8 345 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 MNTQ99583 582 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 PTTG2Q9NZH5 202 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 UGT2A1Q9Y4X1 527 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 CCDC160A6NGH7 325 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 E9PI62 339 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 IGHG1P01857 330 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 ALOX5APP20292 161 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 NR4A1P22736 598 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 CLDN17P56750 224 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 OR12D2P58182 307 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 CD200R1LQ6Q8B3 271 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 TMPRSS11AQ6ZMR5 421 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 FOXL2NBQ6ZUU3 175 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 VASH1Q7L8A9 365 aaPredicted RBP11.29□□□□□ -0.6
TRIM39-204ENST00000396548 ZHX1-C8orf76Q96EF9 292 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 TRMT61AQ96FX7 289 aaKnown RBP11.29□□□□□ -0.6
TRIM39-204ENST00000396548 OR51E2Q9H255 320 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 KLHL9Q9P2J3 617 aa11.29□□□□□ -0.6
TRIM39-204ENST00000396548 MPZL1O95297 269 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 ABHD16AO95870 558 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 HRGP04196 525 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 TBR1Q16650 682 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 ERI1Q8IV48 349 aaKnown RBP11.28□□□□□ -0.6
TRIM39-204ENST00000396548 RNF128Q8TEB7 428 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 MCHR2Q969V1 340 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 C4orf36Q96KX1 117 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 INTS14Q96SY0 518 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 TRGV5A0A0B4J1U4 118 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 LRRTM2O43300 516 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 GPX5O75715 221 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 TGFBR1P36897 503 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 NFATC3Q12968 1075 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 GPR50Q13585 617 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 C10orf128Q5T292 105 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 PDSS1Q5T2R2 415 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 LIPKQ5VXJ0 399 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 RPUSD3Q6P087 351 aaKnown RBP11.28□□□□□ -0.6
TRIM39-204ENST00000396548 KLBQ86Z14 1044 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 C20orf196Q8IYI0 205 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 OTOSQ8NHW6 89 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 FOXN4Q96NZ1 517 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 TIGARQ9NQ88 270 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 ST6GALNAC2Q9UJ37 374 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 MAGEB4O15481 346 aaPredicted RBP11.28□□□□□ -0.6
TRIM39-204ENST00000396548 KHDRBS3O75525 346 aaKnown RBP11.28□□□□□ -0.6
TRIM39-204ENST00000396548 ACTA2P62736 377 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 ACTG2P63267 376 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 KCNMB1Q16558 191 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 FCRLAQ7L513 359 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 ADGRE4PQ86SQ3 457 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 TMEM45BQ96B21 275 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 PELI1Q96FA3 418 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 AMELYQ99218 206 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 PRDM14Q9GZV8 571 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 RCE1Q9Y256 329 aa11.28□□□□□ -0.6
TRIM39-204ENST00000396548 CEP295Q9C0D2 2601 aa11.27□□□□□ -0.6
TRIM39-204ENST00000396548 MT-ND5P03915 603 aa11.27□□□□□ -0.6
TRIM39-204ENST00000396548 CAPZA2P47755 286 aa11.27□□□□□ -0.6
TRIM39-204ENST00000396548 SELENOPP49908 381 aa11.27□□□□□ -0.6
TRIM39-204ENST00000396548 CLRN1P58418 232 aa11.27□□□□□ -0.6
TRIM39-204ENST00000396548 GLO1Q04760 184 aa11.27□□□□□ -0.6
TRIM39-204ENST00000396548 DNM1P34Q6PK57 102 aa11.27□□□□□ -0.6
TRIM39-204ENST00000396548 MEIOBQ8N635 442 aa11.27□□□□□ -0.6
TRIM39-204ENST00000396548 FNDC8Q8TC99 324 aa11.27□□□□□ -0.6
TRIM39-204ENST00000396548 RNF122Q9H9V4 155 aa11.27□□□□□ -0.6
TRIM39-204ENST00000396548 SLC24A3Q9HC58 644 aa11.27□□□□□ -0.6
TRIM39-204ENST00000396548 PAQR5Q9NXK6 330 aaPredicted RBP11.27□□□□□ -0.6
TRIM39-204ENST00000396548 GLTPQ9NZD2 209 aa11.27□□□□□ -0.6
TRIM39-204ENST00000396548 MRM2Q9UI43 246 aaKnown RBP11.27□□□□□ -0.6
TRIM39-204ENST00000396548 ALPK2Q86TB3 2170 aa11.27□□□□□ -0.61
TRIM39-204ENST00000396548 A0A1W2PPW3 197 aa11.27□□□□□ -0.61
TRIM39-204ENST00000396548 NPIPA2E9PIF3 369 aa11.27□□□□□ -0.61
TRIM39-204ENST00000396548 NPIPA3F8WFD2 350 aa11.27□□□□□ -0.61
TRIM39-204ENST00000396548 TAF4O00268 1085 aa11.27□□□□□ -0.61
TRIM39-204ENST00000396548 ZNF593O00488 134 aaPredicted RBP11.27□□□□□ -0.61
TRIM39-204ENST00000396548 OGG1O15527 345 aa11.27□□□□□ -0.61
TRIM39-204ENST00000396548 PLPP2O43688 288 aa11.27□□□□□ -0.61
TRIM39-204ENST00000396548 AQP8O94778 261 aa11.27□□□□□ -0.61
TRIM39-204ENST00000396548 ZNF24P17028 368 aa11.27□□□□□ -0.61
TRIM39-204ENST00000396548 VBP1P61758 197 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms