RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 SIT1Q9Y3P8 196 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 EYSQ5T1H1 3165 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 MANBAO00462 879 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 EREGO14944 169 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 FRS3O43559 492 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 SELENOWP63302 87 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 RIPPLY1Q0D2K3 151 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 ZNF630Q2M218 657 aaPredicted RBP7.74□□□□□ -1.17
NDE1-202ENST00000396355 TMEM268Q5VZI3 342 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 OR7E24Q6IFN5 339 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 COMMD2Q86X83 199 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 VRK3Q8IV63 474 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 OR4K17Q8NGC6 315 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 OR13C2Q8NGS9 318 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 OR10J5Q8NHC4 309 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 RAB39BQ96DA2 213 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 SENP5Q96HI0 755 aaPredicted RBP7.74□□□□□ -1.17
NDE1-202ENST00000396355 TMEM208Q9BTX3 173 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 TMEM121BQ9BXQ6 578 aaPredicted RBP7.74□□□□□ -1.17
NDE1-202ENST00000396355 SLCO5A1Q9H2Y9 848 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 CCDC86Q9H6F5 360 aaKnown RBP7.74□□□□□ -1.17
NDE1-202ENST00000396355 PPP1R3EQ9H7J1 279 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 ELL3Q9HB65 397 aaPredicted RBP7.74□□□□□ -1.17
NDE1-202ENST00000396355 GPR173Q9NS66 373 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 MOKQ9UQ07 419 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 PCDHB1Q9Y5F3 818 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 SCN5AQ14524 2016 aa7.74□□□□□ -1.17
NDE1-202ENST00000396355 H7C4K7 107 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 M0R3H8 397 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 ARNTLO00327 626 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 INSIG1O15503 277 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 LPOP22079 712 aaPredicted RBP7.73□□□□□ -1.17
NDE1-202ENST00000396355 PSMA3P25788 255 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 CORO1AP31146 461 aaKnown RBP7.73□□□□□ -1.17
NDE1-202ENST00000396355 ACTR1BP42025 376 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 CTSOP43234 321 aaPredicted RBP7.73□□□□□ -1.17
NDE1-202ENST00000396355 TSFMP43897 325 aaKnown RBP7.73□□□□□ -1.17
NDE1-202ENST00000396355 POLR2HP52434 150 aaKnown RBP7.73□□□□□ -1.17
NDE1-202ENST00000396355 CXADRP78310 365 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 GABREP78334 506 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 SRSF3P84103 164 aaKnown RBP7.73□□□□□ -1.17
NDE1-202ENST00000396355 HNF4GQ14541 408 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 MEF2DQ14814 521 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 HAGHQ16775 308 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 GFI1BQ5VTD9 330 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 CBLL1Q75N03 491 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 ZNF676Q8N7Q3 588 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 ZNF709Q8N972 641 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 FIBINQ8TAL6 211 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 OR5B12Q96R08 314 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 SGK2Q9HBY8 427 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 PLCXD1Q9NUJ7 323 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 DTX4Q9Y2E6 619 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 FCF1Q9Y324 198 aaKnown RBP7.73□□□□□ -1.17
NDE1-202ENST00000396355 ZNF106Q9H2Y7 1883 aaKnown RBP7.73□□□□□ -1.17
NDE1-202ENST00000396355 C5orf52A6NGY3 159 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 C5orf67F2Z3F1 127 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 PRODHO43272 600 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 GALR2O43603 387 aaPredicted RBP7.73□□□□□ -1.17
NDE1-202ENST00000396355 DRD2P14416 443 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 DGKAP23743 735 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 CTSSP25774 331 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 SULT1A1P50225 295 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 ZNF41P51814 821 aaPredicted RBP7.73□□□□□ -1.17
NDE1-202ENST00000396355 RGS8P57771 180 aaPredicted RBP7.73□□□□□ -1.17
NDE1-202ENST00000396355 OR1J1Q8NGS3 322 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 GPR119Q8TDV5 335 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 NUDT11Q96G61 164 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 SERINC2Q96SA4 455 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 ARV1Q9H2C2 271 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 OR52A5Q9H2C5 316 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 SFXN1Q9H9B4 322 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 HCFC1R1Q9NWW0 138 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 SUSD2Q9UGT4 822 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 DLEU1O43261 78 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 SELENOFO60613 162 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 PDYNP01213 254 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 TRGC2P03986 189 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 ALPPL2P10696 532 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 MUC1P15941 1255 aaPredicted RBP7.73□□□□□ -1.17
NDE1-202ENST00000396355 HIST1H1BP16401 226 aaKnown RBP7.73□□□□□ -1.17
NDE1-202ENST00000396355 RIPPLY3P57055 190 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 TLE1Q04724 770 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 NKAIN1Q4KMZ8 207 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 TEX30Q5JUR7 227 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 C9orf64Q5T6V5 341 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 DCAF12L2Q5VW00 463 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 UQCC3Q6UW78 93 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 SBSNQ6UWP8 590 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 ACOT7LQ6ZUV0 252 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 ZNF100Q8IYN0 542 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 MUC20Q8N307 709 aaPredicted RBP7.73□□□□□ -1.17
NDE1-202ENST00000396355 PIGXQ8TBF5 258 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 LKAAEAR1Q8TD35 194 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 CORO2AQ92828 525 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 APIPQ96GX9 242 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 MSLNLQ96KJ4 702 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 PRR14Q9BWN1 585 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 CSAG2Q9Y5P2 127 aa7.73□□□□□ -1.17
NDE1-202ENST00000396355 ZC3H12DA2A288 527 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms